Q9Y5G7  PCDG6_HUMAN

Gene name: PCDHGA6   Description: Protocadherin gamma-A6

Length: 932    GTS: 2.619e-06   GTS percentile: 0.833     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 624      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELAEHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSP 100
gnomAD_SAV:    T  LH#QLPHRK   RR#PPEKP*ES   H P#CV    D VFLADS I   V  L   E  R S IC D# K  C  A* SGV  #SGT CKD  D # 
Conservation:  3110101001111314123500121212234395638921387269555389553323511435566336326563651238295534768785692212
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:             HHHHHHHHHHHHHHHHHHHH      HHH        HHHHH    HHHHHH  EEEEE      EEE     EEEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHHHHHHHHHH   EEE  H      EE HHHHHH   HHHHHH   EEEE    EEEEE      EEE     HHHH     
SS_PSSPRED:             HHHHHHHHHHHHHHHHHHHHHHH           EE HHHHH    HHHH    EEEEE     EEEE     EEE      HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD D                                                                         
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:   DDDDDD D                                                                                            
CARBOHYD:                                                                                      N                   

                       10        20        30        40        50        60        70        80        90     
AA:            RCLVSFNILVEDKLNLYPVEVEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSVDVQSEAHGPKYPELVLEGTL 200
gnomAD_SAV:     Y L YSTF       * M     GF E IL#    K  ME P#KP  T GV  T   A HA L F      #D C L  E#*RD R  T#L#    D  
Conservation:  2923354663743436426489719588838191122225452933135364380250939572946626173141475714322124034446794127
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE             EEEEEEE                   HHH  EEE      EEEEEE        EEEHH    
SS_SPIDER3:     EEEEEEEEEE     EEEEEEEEE         H H EEEEEEE     E E               EEE      EEEEEE      EEEEEE     
SS_PSSPRED:     EEEEEEEEEE   EE EEEEEEEE            EEEEEEE                          E      EEEEEE         EEEE    
DO_DISOPRED3:                             DDDDDD DD                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                     D         DDD     

                       10        20        30        40        50        60        70        80        90     
AA:            DREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTPMFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE 300
BenignSAV:                                                    S                                                    
gnomAD_SAV:     #KV# INH LH ##  SH# S   #K    I  M ES#     T  H N R        #    P N      #G     M T  ## ET R KI #EK
Conservation:  9892211427373619994524754427272549399739472443824261953425504335272829392543536451222151223705420493
SS_PSIPRED:          EEEEEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEE   HHHHH EEE     E
SS_SPIDER3:         EEEEEEEEEEE     E EEEEEEEEEE        E   EEEEEE        EEEEEE         EEEEEEEE    HHH EEEE     E
SS_PSSPRED:      HHHHHHHHHHHHH         EEEEEEEEEE           EEEEEEE      EEEEEEEEE        EEEEEEE   HHHHHHHHH     E
DO_DISOPRED3:                                             D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                               DD   D D                                

                       10        20        30        40        50        60        70        80        90     
AA:            ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESAPPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGN 400
gnomAD_SAV:      I  DP#   LT ** D   # ES F#G V     VS  SE  SD AA FERKKV   PT  K  T   MLVQ  #Q R   S   GG   D  N*  D
Conservation:  6342215857221263336362823642344552616494998393524673243639454386555444419196518827193421348825434334
SS_PSIPRED:    EEE          EEEEEEEEE      EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE    
SS_SPIDER3:    EEE E        EEEEEEEEEE     EEEEEEEEEEE      EEEEEE  E          EEEEEE E         EEEE      EEEEE    
SS_PSSPRED:    EEE           EEEEEEEEE      EEEEEEEEEEE     EEEEEE            EEEEEEEE          EEEE       EEEE    
DO_DISOPRED3:                                           D  D DDD  D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                     DDDDD                                             

                       10        20        30        40        50        60        70        80        90     
AA:            YYRLVTNAALDREEVFLYNITVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPDVDQNAQVSYSLAEDTLQGAP 500
gnomAD_SAV:      *  K  SVV  AELFN LS     N ITAQT   VF  SMVG S  T   R   H D    SS SD CV      G E#E K    H RS* II  V 
Conservation:  8636361118989124096675364918375744131514162948986919121362235189843936533528092922396364945132121414
SS_PSIPRED:     EEEEE            EEEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE        
SS_SPIDER3:    EEEEEE      HH     EEEEEEE        EEEEEEEEE            EEEEEE        EEEEEE E       EEEEEEEE   E  EE
SS_PSSPRED:     EEEEE            EEEEEEE         EEEEEEEEE             EEEEEE       EEEEEE          EEEEEE         
DO_DISOPRED3:                                                 DD                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                        DDDD DDD   D      D                            D  D            
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            LSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
gnomAD_SAV:    P PNLTV FNS   #D C  #C #  E L  M VGHTW S#F  KLA #  LPEP E E KFP* #  I#SF DLK E PPSKRS #LN M E EG  V*
Conservation:  5662475653694558536896844425273638294838564634642636395989394798943535574548567665669998888986939886
SS_PSIPRED:     EEEEEEE     EEEEE    HHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    H
SS_SPIDER3:     E EEEEE     EEEEE       EEEEEEEEEEE      E EEEEEEEEE       EEEE         EEEE E        EEEEEEEE     
SS_PSSPRED:      EEEEEE    HHHHHHH  HHHHHHHHEEEEEE         EEEEEEEEEE                    E           EEEEEEEEE     
DO_DISOPRED3:                                            D                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                 DDDD       DDDDD                      
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAV 700
gnomAD_SAV:     V#V *H    I  *     P MSD #KVGT V   T  KR #  IRE V SRVCTNA#V L # N FS LP#EVDN    TIS# W  S    M#ATV 
Conservation:  9889683746657578726854699777591436783578393536384846667656455665755675584563322120121222874798475537
STMI:                                                                                                      MMMMMMMM
SS_PSIPRED:    HHHHHHH         EEE       EEHHHHHHHH    EEEEEEEE      EEEEEEEEEEE  HHHHH                 HHHHHHHHHHH
SS_SPIDER3:    HEEEHHEEHE      EEE      EEEEHH         EEEEEEEE  E   EEEEEEEEEEE   HHHH                 HHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHH      EEE    HHHHHHHHHHHHHHH EEEEEEEE       EEEEEEEEEE   HHHHHHH              HHHHHHHHHHH
DO_DISOPRED3:                                                                          DDDDDDDDDD D                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                          N               

                       10        20        30        40        50        60        70        80        90     
AA:            SCVFLAFVIVLLALRLQRWHKSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLINQESYEKSEPLLITQDLLET 800
gnomAD_SAV:      I PDL  A    IPKL*D  H#  VLRSS   T#D*QS #ADRI   PKA   DI  S   #   R  R*  C  MV# RV C  R*  P      KM
Conservation:  8658535533544464356323223113211402353623463444356663856645454585363336322422325221313312223311012000
STMI:          MMMMMMMMMMMMM                                                                                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHH  HHHHHH                         EEEEEEE        EE                         HHHH  
SS_SPIDER3:    HHHHHHHHHHHHHH H     HHHHH      E                   EEEEEEE        EE             H           H HH  
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH   HHHHHHH                          EEEE                                          
DO_DISOPRED3:                                                                              DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                         DDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                  DD              D  D 

                       10        20        30        40        50        60        70        80        90     
AA:            KGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
gnomAD_SAV:         EPPK L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH C     LD 
Conservation:  2220000220222222222222222222222222222222222222222222222222222222222222222222222222222222222222222222
SS_PSIPRED:        HHH                                     HHHHH  EEEEHHHHH                                  EEE   
SS_SPIDER3:        HH                                      HHHHH HHHEHH HH                  E                EEE   
SS_PSSPRED:       HHH                                      HHHHHHHHHHHHHHHH                                  EE    
DO_DISOPRED3:  DDDDDDDDD        D   DDDDDDDDDDDD                                                                   
DO_SPOTD:      DDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDD                                                                 
DO_IUPRED2A:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDDD DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDD

                       10        20        30  
AA:            NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
gnomAD_SAV:    S     TV  Q A   E   S    L     *
Conservation:  22222222222222222222222222222222
SS_PSIPRED:                                    
SS_SPIDER3:       E                            
SS_PSSPRED:     HHH                            
DO_DISOPRED3:    DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:        D  DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD