Q9Y5G9  PCDG4_HUMAN

Gene name: PCDHGA4   Description: Protocadherin gamma-A4

Length: 962    GTS: 2.073e-06   GTS percentile: 0.679     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 553      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MHFILDPEDPGAPQASTEGKPKHRRLRGGVVMAAPPARPDHTRLLQICLLLGVLVEIRAEQILYSVFEEQEEGSVVGNIAKDLGLAPRELAERGVRIVSR 100
gnomAD_SAV:                   WI#  # RW  C   #TVTSHT#A   P FH     EFPM    GE  SLASQ*       D  GNE   S QK V #RACS T#
Conservation:  2222222222222222222222222222222311010100111131412350012121223439563892138726955538955332351143556633
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                         
SS_PSIPRED:                            HH               HHHHHHHHHHHHHHHHHHH      HHH       HHHHHH    HHHHHH   EEEE 
SS_SPIDER3:      EE                  H        E         HHHHHHHHHHH HHHHHH  EEEEE HE     EE HHHHH    HHHHHH   EEEE 
SS_PSSPRED:                         HHHHHH               HHHHHHHHHHHHHHHHHHHH             EHHHHHHH   HHHHHH   EEEE 
DO_DISOPRED3:  BBBBDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDBBDDD                                              
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                          
DO_IUPRED2A:     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            GRTQLFALNPRSGTLVTAGRIDREELCDRSPNCVTNLEILLEDTVKILRVEVEIIDVNDNPPSFGTEQREIKVAENENPGARFPLPEAFDPDVGVNSLQG 200
BenignSAV:                                                                                     T                   
gnomAD_SAV:    SKMH  S   H VI A  SM Y  D W   L   AK  T#   I T  QI M   NFI   HNS  K     L K KTSRT L  L     N A K  # 
Conservation:  6326563651238295534768785692212292335466374343642648971958883819112222545293313536438025093957294662
SS_PSIPRED:       EEEEE     EEEE     HHHHH      EEEEEEEEE   EEEEEEEEEE             EEEEEE                         E
SS_SPIDER3:      EEEEEE     EEEE     HHHH      EEEEEEEEE     EEEEEEEEEE E           EEEEEEE     EEE               E
SS_PSSPRED:       EEEEE     EEEE     HHHH       EEEEEEEEE   EEEEEEEEEEE            EEEEEEE                         
DO_DISOPRED3:                                                            DD DDD DD                         D       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                              D    DDDDDDDD DDDDD   DDDDDD             

                       10        20        30        40        50        60        70        80        90     
AA:            YQLNSNGYFSLDVQSGADGIKYPELVLERALDREEEAVHHLVLTAFDGGDPVRSGTARILIILVDTNDNAPVFTQPEYHVSVRENVPVGTRLLTVKATDP 300
gnomAD_SAV:       D #S  F EM  ETN MT  VVM Q#S  HQK  I   I M  N*SE  # C  SF   F   SN   M  H #*RL FC KDLIDPW  A     L
Conservation:  6173141475714322124034446794127989221142737361999452475442727254939973947244382426195342550433527282
SS_PSIPRED:    EE      EEEEEEE       EEEHH          EEEEEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEEE  
SS_SPIDER3:    EE      EEEEEEE     EEEEEEEE         EEEEEEEEEE     EEEEEEEEEEEE        E   EEEEEE        EEEEEE    
SS_PSSPRED:     EE      EEEEE        HHHHHHHHHHHHHHHHHHHHHHHH         EEEEEEEEEEE          EEEEEEE      EEEEEEE    
DO_DISOPRED3:                                                                            D                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                            DDDD               DDDDD D 

                       10        20        30        40        50        60        70        80        90     
AA:            DEGANGDVTYSFRKVRDKISQLFQLNSLSGDITILGGLDYEDSGFYDIDVEAHDGPGLRARSKVLVTVLDENDNAPEVTVTSLTSSVQESSSPGTVIALF 400
gnomAD_SAV:     D  SE AM   Q LGE  P  LP  #   AVA   D AF  FES GV I #  R R *D    MMI      SP K  D   AG  R Y  Q    T  
Conservation:  9392543536451222151223705420493634221585722126333636282364234455261649499839352467324363945438655544
SS_PSIPRED:         EEEEEEEE   HHHHH EEE     EEEEE         EEEEEEEEE      EEEEEEEEEE       EEEEEE            EEEEEE
SS_SPIDER3:         EEEEEEEE      HEEEEE     EEEEEE       EEEEEEEEEEE     EEEEEEEEEE        EEEEE             EEEEE
SS_PSSPRED:          EEEEEEE   HHHHHHHHH      EEE            EEEEEEE      EEEEEEEEEEEE      EEEEE            EEEEEE
DO_DISOPRED3:                                                                          D  DDDDD DDD                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      D DDD                                                                   DDDDDDDDDDDD          D  

                       10        20        30        40        50        60        70        80        90     
AA:            NVHDSDSGGNGLVTCSIPDNLPFTLEKTYGNYYRLLTHRTLDREEVSEYNITVTATDQGTPPLSTETHISLQVMDINDNPPTFPHASYSAYIPENNPRGA 500
gnomAD_SAV:    SER NA#E   R P  F      I   PC    LF SYTIPAK    *F        *RI             T MI      L V   VC#R  S   V
Conservation:  4419196518827193421348825434334863636111898912409667536491837574413151416294898691912136223518984393
SS_PSIPRED:    EEE        EEEEE      EEEEE     EEEEE             EEEEEE        EEEEEEEEEE            EEEEEE        
SS_SPIDER3:    EE E        EEEE      EEEEEEE  EEEEEE     HH      EEEEEEE        EEEEEEEEE  E         EEEEEE        
SS_PSSPRED:    EEE        EEEEE       EEEE   HHHHHH              EEEEEE         EEEEEEEEE             EEEEE        
DO_DISOPRED3:                                                                               DDD                    
DO_SPOTD:                                                                                                          
DO_IUPRED2A:              D                                  DDDDDDDDDDDDDDDDDDDDDDDDDD DDD        DDDDDDD        D
CARBOHYD:                                                       N                                                  

                       10        20        30        40        50        60        70        80        90     
AA:            SILSMTAQDPDSGDNARITYSLAEDTFQGAPLSSYVSINSNTGILYALCSFDYEQFRDLQLLMTASDSGDPPLSSNVSLSLFVLDQNDNVPEILYPTFPT 600
gnomAD_SAV:     L  V VKEA   ES *FSH  S*GILPR     H  N CS R     Y LVC *   MKMPKIGG N E    I   PI Y  #  N  S    #  SI
Conservation:  6533528092922396364945132121414566247565369455853689684442527363829483856463464263639598939479894353
SS_PSIPRED:    EEEEEEEE        EEEEEEE      EE EEEEEEE     EEEEE    HHEEEEEEEEEEE         EEEEEEEEE       EEE      
SS_SPIDER3:    EEEEEE E      EEEEEEEEEE  E  E  EEEEEEE     EEEEE  E    EEEEEEEEEEE      E EEEEEEEEE       EEEE     
SS_PSSPRED:     EEEEEE         EEEEEE           EEEEEE    HHHHHHH  HHHHHHHHHHHEEE         EEEEEEEEEE               
DO_DISOPRED3:                                                                           D D                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDDDDDD    DDDDDD                                                                          DD D   
CARBOHYD:                                                                                 N                        

                       10        20        30        40        50        60        70        80        90     
AA:            DGSTGVELAPRSADSGYLVTKVVAVDRDSGQNAWLSYSLLKSSEPGLFAVGLHTGEVRTARALLDRDALKQRLVVVVQDHGQPPLSATVTLTVAVADSIP 700
BenignSAV:                                                                            K                            
gnomAD_SAV:    EAFSA *MTA# S FAC G EA T  K  S     Y  I  #RK    VER   SKLS SPTPPE  P N K AL #RH    L LT  I  M   N  S
Conservation:  5574548567665669998888986939886988968374665757872685469977759143678357839353638484666765645566575567
SS_PSIPRED:                      EEEEEEEE    HHHHHHHH         EEE       EEHHHHHHHHHH  EEEEEEEE      EEEEEEEEEEE  HH
SS_SPIDER3:       EEEEEEE        EEEEEEEE     EEHEEHHEH       EEE      EEE EH       H EEEEEEEE  E   EEEEEEEEEEE   H
SS_PSSPRED:        EE           EEEEEEEEE     HHHHHHHHHH       EEE    HHHHHHHHHHHHHHH EEEEEEEE       EEEEEEEEEE   H
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:       DD                                                                                              

                       10        20        30        40        50        60        70        80        90     
AA:            DVLADLGSLKPSADPDDSGLTLYLVVAVAAVSCVFLAFVTVLLALKLRRWHKSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEVSLTADSRKSHLI 800
BenignSAV:                  H                                                                                      
gnomAD_SAV:     DP G   IR   HS Y   AVC  M # TI *IS T AK R TF  KP*#  S  Q   #  S  L LQS# MGR WS PLICF   FVIGAL R Y  
Conservation:  5584563322120121222874798475537865853553354446435632322311321140235362346344435666385664545458536333
STMI:                                 MMMMMMMMMMMMMMMMMMMMM                                                        
SS_PSIPRED:    HHHH                HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH   HHHH                          EEEEEEE        EE
SS_SPIDER3:    HHHH              HHHHHHHHHHHHHHHHHHHHHHHHHHH H     HHHEH             E            EEEEEEE       EEE
SS_PSSPRED:    HHHHH               EEEHHHHHHHHHHHHHHHHHHHHHHHHHH    HHHHHH                          EEEE          E
DO_DISOPRED3:     DDDDDDDDDDDD                                                                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FSQPSYADTLISRESCEKSEPLLITQDLLETKGDPNLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGA 900
gnomAD_SAV:     F*     P  NW*NY   KL    HY      H    K L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   RA 
Conservation:  6322422325221313312223311012000222000022222222222222222222222222222222222222222222222222222222222222
SS_PSIPRED:    EE                       HHHH                                             HHHHHHHHHHHHHHHHH         
SS_SPIDER3:    E       H                H H                                              HHHHHHHHHHHHHHH           
SS_PSSPRED:    E                                                                        HHHHHHHHHHHHHHH            
DO_DISOPRED3:          DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDDDD                                     
DO_SPOTD:                    DDDDDDDD   DDDDDDDDDDDDDDDDDDDD    DDDDDDDDDDDDDDDDDD     DDDDD          DDDDDDDD     
DO_IUPRED2A:                                   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDD  DD  DDDDDDDDDDDDD

                       10        20        30        40        50        60  
AA:            GTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 962
gnomAD_SAV:    D V   TC R  S RHYMLH H     LD S     TV  Q D   E   S    L     *
Conservation:  22222222222222222222222222222222222222222222222222222222222222
SS_PSIPRED:                                                   HH             
SS_SPIDER3:            E                E      H                             
SS_PSSPRED:                                   HHH                            
DO_DISOPRED3:                    D      D     DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                     DD DDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD