Q9Y5H1  PCDG2_HUMAN

Gene name: PCDHGA2   Description: Protocadherin gamma-A2

Length: 932    GTS: 2.532e-06   GTS percentile: 0.814     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 592      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRGRSQLFALNPRSGSLVTANRIDREELCAQSA 100
BenignSAV:         R                                                                                               
gnomAD_SAV:    TE  *Q SR*  V#P S   V  RD# T  LLCT PK    #FY  TVT         M K*  L F   M#H  D  R #SI IIE G E#K F*#  S
Conservation:  3000010101103213113321111110344374438721254457454469453101311432743123102542541226242523558983472111
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:       HHH  HHHHHHHHHHHHHHHHHHHH       HHH       HHHHHH    HHHHHH   EEE       EEE     EEEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHHH HHHHHH  EEEEE H      EE HHHHH    HHHHHH   EEEEE  EEEEEE      EEE     HHHH     
SS_PSSPRED:       HHH   HHHHHHHHHHHHHHHHHHH               EEHHHHHHH   HHHHHH   EEEE    EEEEE      EEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDBBBDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDD                                                                                
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PCLLNFNILLEDKLTIYSVEVEITDINDNAPRFGVEELELKISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPELVLERSL 200
gnomAD_SAV:    HF    S  QDE   VC  GL  AG KAS SSS A G *  T  N KQ   ML   E VT  R  VP* HPV   GN   Y Q#AT  D  S     L  
Conservation:  1825324453722424315154619599629191110214442924128244350172819270536528062141582713211123122367673228
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE             EEEEEE                     HH  EEE      EEEEEEE     EEEEEHH    
SS_SPIDER3:     EEEEEEEEE     EEEEEEEEEE           E EEEEEEE     EEE                EE      EEEEEEE     EEEEEEEE   
SS_PSSPRED:      EEEEEEEEE  EEEEEEEEEEEEE          EEEEEEE       EE                          EEEE         HHHHH    
DO_DISOPRED3:                                                             D D                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                       DDD          DD               D           D     

                       10        20        30        40        50        60        70        80        90     
AA:            DREEEAVHHLVLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYFLEKSPGETSEVFELKSTSGE 300
gnomAD_SAV:     SQKK     IP#T N #VLL   IFSVY EDP EKN V    *   CLN    #H   G#   AP V#E*DCC  LA  P   LR      * R  P K
Conservation:  8973211315281918682723673304262647589729393422813261953324315326373839471752527120212111113705210391
SS_PSIPRED:          EEEEEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEE    HHHH EEE     E
SS_SPIDER3:         EEEEEEEEEEE     EEEEEEEEEEEE        E   EEEEEE        EEEEEE         EEEEEEEE      E EEEE     E
SS_PSSPRED:    HHHHHHHHHHHEEEEE        EEEEEEEEEE           EEEEEE       EEEEEEEE        EEEEEEEEE   HHHH EE      E
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                              DD                D                             D        

                       10        20        30        40        50        60        70        80        90     
AA:            LTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMTSATSSVSEDSLPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDN 400
gnomAD_SAV:     I  R PGN GV L  V TQ#PN L    ST ITDR R MD  VS C  S  STA    C   AM RF  # GGV E  S  I  F K# # MS#N I# 
Conservation:  5142216778210066415252932571313452505283999391515252222538432245365553638195518423152512138827225133
SS_PSIPRED:    EEE         EEEEEEEEEE       EEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE    
SS_SPIDER3:    EEE          EEEEEEEEE       EEEEEEEEEE       EEEEE    E       EEEEEEEEE          EEE      EEEEE    
SS_PSSPRED:    EEE            EEEEEEE       EEEEEEEEEEEE     EEEEE             EEEEEEE          EEEE        EEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                   D                   

                       10        20        30        40        50        60        70        80        90     
AA:            YYRLVTTRALDREQFSFYNITLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYSFAEDTVQGAP 500
gnomAD_SAV:      Q# K  VFGGA Y   ## P T G EKTC   N   F R#V TK#KV  # CI  FI*V K KS E F  *MM R RE K #V   H  S     R H
Conservation:  8645463117789213167675281829174634222505163857874728120372444177723644533428073731266362935122222324
SS_PSIPRED:     EEEE              EEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEEE        EEEEEEE      EE
SS_SPIDER3:    EEEEEE             EEEEEE         EEEEEEEEE EE         EEEEEE        EEEEEE E       EEEEEEEE      E 
SS_PSSPRED:     EEE               EEEEEE          EEEEEEEEEE           EEEEE        EEEEEE          EEEEEEE        
DO_DISOPRED3:                                                  D                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                          DDD            DDDDDD       DDDDDDD          
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            LSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVLDQNDNAPEILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ 600
gnomAD_SAV:     P F#CN#F    F TQC  GF HV*NM     VQYG TTQ C#S     LM   KN S  T    LLI #  VM   LH S AS    #L T N V A 
Conservation:  5853575444694556336897943434141616184829585464753625292887284686832322343427647435227487688676838575
SS_PSIPRED:     EEEEEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    H
SS_SPIDER3:      EEEEEE     EEEEE       EEEEEEEEEEE      E EEEEEEEEE       EEEE          EEE E        EEEEEEEE     
SS_PSSPRED:      EEEEEE    HHHHHHH  HHHHHHHHEEEEEEE        EEEEEEEEEE                    E           EEEEEEEEE     
DO_DISOPRED3:                                            D D                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                 DD D       DDD D                      
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYHLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAV 700
gnomAD_SAV:    DV   *R  QGR Q F LA #RS QLH  *VRQGGNTF##  M GV V# *AL     MV#M   E VSNL DYVDGHK  TK S# N   H   VAT  
Conservation:  6575763534367546724656586564272424483367475627485826548674443645555544443353121120011232453697665635
STMI:                                                                                                      MMMMMMMM
SS_PSIPRED:    HHHHHHHH        EEE       EEHHHHHHHHHH  EEEEEEEE      EEEEEEEEEEE   HHHH                 HHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHHH      EEE      EEEEHH         EEEEEEEE  E   EEEEEEEEEEE   HHH                  HHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHH      EEE    HHHHHHHHHHHHHHH EEEEEEEE       EEEEEEEEEE   HHHHHHH              HHHHHHHHHHH
DO_DISOPRED3:                                                                          DD  DDDDDDDD                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                          N               

                       10        20        30        40        50        60        70        80        90     
AA:            SCVFLAFVIVLLAHRLRRWHKSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKDFLSAPQSLLEE 800
gnomAD_SAV:     WI  DL VL  # K WP* E C  *P A G I  R      AER P     C     F EY L      S  TC#    R  #G  EG  ##   P *Q
Conservation:  6358434544444363232212322122211322222324232454446423533433432453242212314322345221121101402010110000
STMI:          MMMMMMMMMMMMM                                                                                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHH   HHHHH                         EEEEEEE        EE                         HHH   
SS_SPIDER3:    HHHHHHHHHHHHHH   H   HHHHH             EE      E    EEEEEEE       EEE                           H HH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH   HHHHHHH                          EEEE                                          
DO_DISOPRED3:                                                                               DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                       DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                 D     

                       10        20        30        40        50        60        70        80        90     
AA:            EREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS 900
gnomAD_SAV:    #G Q LFRK L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH C     LD 
Conservation:  0000011011111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:                                                HHHHHHHHHHHHHHHHH                                       
SS_SPIDER3:    HHHH                                        HHHHHHHHHHHHHHH                  E                EE    
SS_PSSPRED:                                               HHHHHHHHHHHHHHH                                          
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                   
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    DDDDDDD        DDDDDDDD                                    
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD  DDDDD DDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDD

                       10        20        30  
AA:            NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 932
gnomAD_SAV:    S     TV  Q A   E   S    L     *
Conservation:  11111111111111111111111111111111
SS_PSIPRED:                                    
SS_SPIDER3:      H                             
SS_PSSPRED:     HHH                            
DO_DISOPRED3:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:       DD  DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD