Q9Y5H2  PCDGB_HUMAN

Gene name: PCDHGA11   Description: Protocadherin gamma-A11

Length: 935    GTS: 1.852e-06   GTS percentile: 0.599     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 1      gnomAD_SAV: 508      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MANRLQRGDRSRLLLLLCIFLGTLRGFRARQIRYSVPEETEKGSFVGNISKDLGLEPRELAKRGVRIVSRGKTQLFAVNPRSGSLITAGRIDREELCETV 100
gnomAD_SAV:    I##   C  G      PYV   A   LWV *N C    K Q ATVMCS   #     W     E L  Y# R RILS K LRSG   S    ## VR M 
Conservation:  1100001111111100111100100001021327242873115315644325634211151042354221111143142112615141345897159111
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:       HH    HHHHHHHHHHHHHHHHHHHHH                 HHHHH    HHHHHH  EEEEE    EEEEE     EEEE     HHHHH   
SS_SPIDER3:        HH   HHHHHHHHHHHHHHHHHH H  EEEEE        EE  HHHH    HHHHHH   EEE     EEEEE      EEE     HHHH    
SS_PSSPRED:            HHHHHHHHHHHHHHHHHHHHHH              EE HHHHH    HHHHH    EEEE    EEEEE     EEE      HHHHH   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDD                                                                           
DO_SPOTD:      DDDDDDDDDDD                                                                                         
DO_IUPRED2A:   DD                                                                                                  
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            SSCFLNMELLVEDTLKIYGVEVEIIDINDNAPSFQEDEVEIKVSEHAIPGARFALPNARDPDVGVNSLQSYQLSPNNYFSLQLRGRTDGAKNPELVLEGS 200
BenignSAV:        L                                                                                                
gnomAD_SAV:     F L  V    GG   TNRE M   Y   K# R  GEV    IGKQ    P* P  K# H  GAMS#  N R N#S  V   V # M#  RD Q  QQ  
Conservation:  2292411443342333331315261959962909001011335192411611415117091934053532805103026151101111313224636211
SS_PSIPRED:      EEEEEEEEEE   EEEEEEEEEE             EEEEEE                        EEEE      EEEEEE       EEEEHH   
SS_SPIDER3:      EEEEEEEEEE    EEEEEEEEEE E          EEEEEEEEE    EEE               EEE      EEEEEEE     EEEEEEEE  
SS_PSSPRED:      EEEEEEEEEE   EEEEEEEEEEEE           EEEEEEE      EE                         EEEEE         HHHH    
DO_DISOPRED3:                                                              D D                                     
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                    DD                D         DDDDDD 

                       10        20        30        40        50        60        70        80        90     
AA:            LDREKEAAHLLLLTALDGGDPIRKGAVPIRVVVLDVNDHIPMFTQSVYRVSVPENISSGTRVLMVNATDPDEGINGEVMYSFRNMESKASEIFQLDSQTG 300
gnomAD_SAV:     HQ  DT   P F  F E  S *NAV LVC    YAS   LI   FA CM  A  T  R WL II  M   #A   V V P WS  I   GVLR* #*A 
Conservation:  5848111020525261857161445230606162837751717131282314095311330431529191904143151804120111000250540018
SS_PSIPRED:      HHHHHHEEEEEEEE        EE EEEEEEE            EEEEEE        EEEEEEEE       EEEEEEEE   HHHHH EEE     
SS_SPIDER3:          EEEEEEEEEE   E  EE EEEEEEEEEE           EEEEEE        EEEEEE         EEEEEEEE    HHHHHEEE     
SS_PSSPRED:      HHHHHHHHHHHHHHH         EEEEEEEEE           EEEEEEE       EEEEEEE        EEEEEEEE   HHHHHHH       
DO_DISOPRED3:                                              D                                                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                               DDD   DD       DDD                      
CARBOHYD:                                                            N          N                                  

                       10        20        30        40        50        60        70        80        90     
AA:            EVQVRGSLDFEKYRFYEMEIQGQDGGGLFTTTTMLITVVDVNDNAPEITITSSINSILENSPPGTVIALLNVQDQDSGENGQVSCFIPNHLPFKLEKTYG 400
gnomAD_SAV:     A GQR P    C  C T      VE V   S T     H     SK  VI     V K F AD  TV  K  # N A   *   L   R       A*R
Conservation:  1514020485810103240615291232131324252519289719140324211151732113324444361918421631304141111371512311
SS_PSIPRED:    EEEE          EEEEEEEEE       EEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE   
SS_SPIDER3:     EEEEEE       EEEEEEEEEE      EEEEEEEEEE       EEEEE  E          EEEEEEEE         EEEE      EEEEEE  
SS_PSSPRED:    EEEE          EEEEEEEEE       EEEEEEEEEEE     EEEEEE            EEEEEEE           EEEE       EEEE   
DO_DISOPRED3:                                            D  D  DD                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                      DDDD             DDDD         D                  

                       10        20        30        40        50        60        70        80        90     
AA:            NYYKLITSRVLDRELVQSYNITLTATDQGSPPLSAETHVWLNVADDNDNPPVFPHSSYSAYIPENNPRGASIFSVTALDPDSKQNALVTYSLTDDTVQGV 500
gnomAD_SAV:      C V  T  PEGV  R    MV#T  EEN L   D YF   M    N R I  R C     S*   KC #VLA  T NL GN*      C MG    RL
Conservation:  3452524110579800314444424280815242211040516383976291501016031409761351342241709181214525252411001120
SS_PSIPRED:      EEEEE             EEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE        EEEEEEE      E
SS_SPIDER3:     EEEEEE      H  H   EEEEEEE      E EEEEEEEEE EE         EEEEEE        EEEEEE E       EEEEEEEE      E
SS_PSSPRED:      EEEE             EEEEEEE         EEEEEEEEEE            EEEEE        EEEEEE          EEEEEEE       
DO_DISOPRED3:                                                 DDD                                                  
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                        D    DD        DDDDD            DDDDDDD            DDD             D           
CARBOHYD:                         N                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            PLSSYVSINSNTGVLYALQSFDYEQFRDLELRVIARDSGDPPLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDKDSG 600
gnomAD_SAV:    R   H  T   N   *    YEC   PN  P   EH NR#      A P   L  * H GLQ   S I K V  A G GL# V  D   IN  P  R *V
Conservation:  2331244432458151330366451111403051417391534233324140617278416258451121232211433523521334555564481745
SS_PSIPRED:    E EEEEEEE     EEEEE    HHEEEEEEEEEEE         EEEEEEEEE       EEE                       EEEEEEEEE    
SS_SPIDER3:      EEEEEEE     EEEEE       EEEEEEEEEEE      E EEEEEEEEE       EEEE         EEEE E        EEEEEEEE    
SS_PSSPRED:      EEEEEEE    HHHHHHH  HHHHHHHHEEEEEEE        EEEEEEEEEE                    E           EEEEEEEEE    
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                  DDDD       DDDDD                     
CARBOHYD:                                                   N                                                      

                       10        20        30        40        50        60        70        80        90     
AA:            QNAWLSYRLLKASEPGLFAVGEHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADSIPEVLADLGSLESLANSETSDLSLYLVVAVAA 700
gnomAD_SAV:    PD#* P CP    K   LT AQN DDLH VQS  N EV  R  L TI# PD S  L  I       NTN ##   ##  DAP D     RLRC MLP DT
Conservation:  3757755142324532471441448552415131436223636342424361334534225243423132322222121101011112134236446532
STMI:                                                                                                       MMMMMMM
SS_PSIPRED:    HHHHHHHH         EEE       EEHHHHHHHH    EEEEEEEE      EEEEEEEEEEE  HHHHHHHH              HHHHHHHHHH
SS_SPIDER3:      HHHHHHHHH      EEE      EEE EH         EEEEEEEE  E   EEEEEEEEEEE   HHHHH              HHHHHHHHHHHH
SS_PSSPRED:     HHHHHHHHHHH      EEE    HHHHHHHHHHHHHHH EEEEEEEE       EEEEEEEEEE  HHHHHHHH              HHHHHHHHHH
DO_DISOPRED3:                                                                            DDDDDDDDDDD               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VSCIFLVFVIVLLALRLWRWHKSRLLQASEGGLAGMPTSHFVGVDGVQAFLQTYSHEVSLIADSQKSHLIFPQPNYGDTLISQESCEKSEPLLIAEDSAI 800
gnomAD_SAV:    L  V      M    M  S R  PM  SFK     V M  L RMEWLP   LIC Y  F FT T      SL RSC# #  N #R      R # AVTVT
Conservation:  5522332432233224322211211111210011112232324323215423132442324245213322212210122301011010011010010001
STMI:          MMMMMMMMMMMMMM                                                                                      
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHH   HHH                           EE EEEE       EEE                      EEE  HHH
SS_SPIDER3:    HHHHHHHHHHHHHHHHH H    HHH              E            EEEEEEE       EEEE                     E     HH
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHH   HHHHHH                           EEEE                                         
DO_DISOPRED3:            DDDD                                                               DDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                         DDDDDDDDD   DDDDD
DO_IUPRED2A:                                                                                   DD                  

                       10        20        30        40        50        60        70        80        90     
AA:            ILGKCDPTSNQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYI 900
gnomAD_SAV:       R  L G #K L  M  H   T  SRIRR R  N IS  S# P      H    V T  V   GP   AA D V   TH R  S RHYMLH H     
Conservation:  1100011111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:    H                                              HHHHHHHHHHHHHHHHH                                    
SS_SPIDER3:    H                                              HHHHHHHHHHHHHHHH                 E                 E 
SS_PSSPRED:                                                   HHHHHHHHHHHHHHH                                      
DO_DISOPRED3:  DDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDD                                                       D      D 
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD     DDDDDDDDD    DDDDDDDDDD                                
DO_IUPRED2A:       DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD    D    DD   DDDDDDDDDDDDDDDD DDDDDDDDDDD DDDDDDDDDD

                       10        20        30     
AA:            PGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 935
gnomAD_SAV:    LD S     TV  L D   E   S    L     *
Conservation:  11111111111111111111111111111111111
SS_PSIPRED:                                       
SS_SPIDER3:         EE                            
SS_PSSPRED:        HHH                            
DO_DISOPRED3:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:          DD  DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD