Q9Y5H4  PCDG1_HUMAN

Gene name: PCDHGA1   Description: Protocadherin gamma-A1

Length: 931    GTS: 2.961e-06   GTS percentile: 0.896     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 555      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MKIQKKLTGCSRLMLLCLSLELLLEAGAGNIHYSVPEETDKGSFVGNIAKDLGLQPQELADGGVRIVSRGRMPLFALNPRSGSLITARRIDREELCAQSM 100
gnomAD_SAV:        E  IAR KQI    YVQ    #AT S Q #  K I  # S V FS      #    H  I#   #  T#F SVT  ND  T #  M PQ  SSEN 
Conservation:  9322132122214132444232434407527252727725544297344256675429422344775477745294762547474746746694767651
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                        
SS_PSIPRED:              HHHHHHHHHHHHHHHHHH               EEEHHHHH    HHHHHH   EEE       EEE     EEEE     HHHHH    
SS_SPIDER3:         H    HHHHHHHHHHH HHHH     EEEE  E     EEHHHHHHH   HHHHHH   EEEE    EEEEE      EEE  EE HHHH     
SS_PSSPRED:             HHHHHHHHHHHHHHHHHH                EEHHHHHHH   HHH     EEEEE     EEEE      EEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDD DD                                                                             
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            PCLVSFNILVEDKMKLFPVEVEIIDINDNTPQFQLEELEFKMNEITTPGTRVSLPFGQDLDVGMNSLQSYQLSSNPHFSLDVQQGADGPQHPEMVLQSPL 200
BenignSAV:                                                        I                                                
gnomAD_SAV:    LY M I ##F  EREVS A  K  #S NSST LR  KV  E KKV      IL S WEN    L L H#S*P#  L  FP   H  N  *YS T   ITS
Conservation:  3937497592474659475499749997559397645295757979279975579577959974979739799276694927435244122976997449
SS_PSIPRED:      EEEEEEEEE   EEEEEEEEEE            EEEEEE        EEE               EEE      EEEEEEE       EEE      
SS_SPIDER3:     EEEEEEEEEE     EEEEEEEEE         H E EEEEEEE     EEE               EEE E    EEEEEE      EEEEEE     
SS_PSSPRED:      EEEEEEEEE      EEEEEEEE         HHHEEEEEE       EE                  E       EEEEE                 
DO_DISOPRED3:                             D                                      D                                 
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                       DDDDD         D    D          D          DDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            DREEEAVHHLILTASDGGEPVRSGTLRIYIQVVDANDNPPAFTQAQYHINVPENVPLGTQLLMVNATDPDEGANGEVTYSFHNVDHRVAQIFRLDSYTGE 300
BenignSAV:                                                                                      Q                  
gnomAD_SAV:    #G   P#     ITPVR#   H      CV*AMVES           P    KSMS      #IS PN#N R S   R   Q   D  TP LCV F   *
Conservation:  9994332725476779992955794739476969799999397555921555975247939616573979993995949499729554535949744497
SS_PSIPRED:          EEEEEEEEE        EEEEEEEEEE            EEEEE         EEEEEEEE       EEEEEEEE   HHHHH EEE     E
SS_SPIDER3:         EEEEEEEEEEE     EEEEEEEEEEEE            EEEEEE        EEEEEE         EEEEEEEE        EEEE      
SS_PSSPRED:     HHHHHHHHHHHHHH         EEEEEEEEEE           EEEEE        EEEEEEE         EEEEEEEE   HHHHHHEEE      
DO_DISOPRED3:                                             D                                                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:         DDDDDDDDD                           DDDDDDD          DDDDDDDDDDD DDDDDDDDD                    
CARBOHYD:                                                                      N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            ISNKEPLDFEEYKMYSMEVQAQDGAGLMAKVKVLIKVLDVNDNAPEVTITSVTTAVPENFPPGTIIALISVHDQDSGDNGYTTCFIPGNLPFKLEKLVDN 400
gnomAD_SAV:     L E  V  K        LL E DVE L EI#A  T S I    L    I  PA  RG SS ES   V# M     E    N    S   L T   F G 
Conservation:  7275539777772293475997997597575975727497799697445749452579756655579795759697549715375743249739977275
SS_PSIPRED:    EEE          EEEEEEEEE       EEEEEEEEE       EEEEEE             EEEEEEEE        EEEEE      EEEEE    
SS_SPIDER3:    EEE     H    EEEEEEEEEE    E EEEEEEEEE        EEEEE             EEEEEEE         EEEEE      EEEEE    
SS_PSSPRED:    EEE          EEEEEEEEE      EEEEEEEEEEEE     EEEEEE            EEEEEEEE          EEEE       EEEE HHH
DO_DISOPRED3:                                           D  DDDDD  D                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                   D DDDD                                              

                       10        20        30        40        50        60        70        80        90     
AA:            YYRLVTERTLDRELISGYNITITAIDQGTPALSTETHISLLVTDINDNSPVFHQDSYSAYIPENNPRGASIFSVRAHDLDSNENAQITYSLIEDTIQGAP 500
gnomAD_SAV:     CH       N    P       S#H*R  S T  S       Y S  ##     T   C TK    R  V   T Q FY D S  LAHAPTKNITRATL
Conservation:  5957996435999255059765774949471965323539275947674729043595455279974777464429292942795473949253323439
SS_PSIPRED:     EEEEE             EEEEEEE       EEEEEEEEEE            EEEEEE        EEEEEEEE        EEEEEEE      EE
SS_SPIDER3:    EEEEEE             EEEEEEE        EEEEEEEEE            EEEEEE        EEEEEE E       EEEEEEEE      E 
SS_PSSPRED:    HHHH              EEEEEEEE        EEEEEEEEEE            EEEEE         EEEEEEE         EEEEE         
DO_DISOPRED3:                                                DDD                                                   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                          DD              DD                           
CARBOHYD:                        N                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            LSAYLSINSDTGVLYALRSFDYEQFRDMQLKVMARDSGDPPLSSNVSLSLFLLDQNDNAPEILYPALPTDGSTGVELAPLSAEPGYLVTKVVAVDRDSGQ 600
gnomAD_SAV:     Y     S   W M # #P N#  LG V  EM# WG    R GIHEC  RC  HR  S SK  * # RP   SRL   RRAED R  M T#AV  G  V 
Conservation:  7747497476797594946777925245372527173937396775951574595999395799933727599779977699767777977997777777
SS_PSIPRED:     EEEEEEE     EEEEE   HHHEE EEEEEEEE         EEEEEEEEE        EE                        EEEEEEEE    H
SS_SPIDER3:     EEEEEEE     EEEEE       EEEEEEEEEEE      E EEEEEEEEE       EEEE          EEE          EEEEEEEE     
SS_PSSPRED:     EEEEEEE    HHHHHHH  HHHHHHHHHHEEEEE        EEEEEEEEEE                    E           EEEEEEEEE     
DO_DISOPRED3:                                            D                                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                 D    DD                         DDDD        D                         
CARBOHYD:                                                  N                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTLTVAVADRISDILADLGSLEPSAKPNDSDLTLYLVVAAAAV 700
gnomAD_SAV:     S* ACC  Q R   F L V RMD LSM#Q   E ETVR   A# I   S  LF  AIMVS  ##E NPH   N S  QA  I K #   P  G PV V 
Conservation:  9599994779997977717577597759475437992779997949579779779777779595975974599794711222142242576797775727
STMI:                                                                                                      MMMMMMMM
SS_PSIPRED:    HHHHHHHH        EEE       EEEHHHHHHHHH  EEEEEEEE      EEEEEEEEEEE  HHHHHH                HHHHHHHHHHH
SS_SPIDER3:    HHHHHHHHH       EEE      EEEEEH      H  EEEEEEEE  E   EEEEEEEEEEE  HHHHHH                HHHHHHHHHHH
SS_PSSPRED:    HHHHHHHHHHH      EEE    HHHHHHHHHHHHHHH EEEEEEEE       EEEEEEEEEE  HHHHHHHH              HHHHHHHHHHH
DO_DISOPRED3:                                                                         DDDDDDDDDDD D                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                                                          N               

                       10        20        30        40        50        60        70        80        90     
AA:            SCVFLAFVIVLLAHRLRRWHKSRLLQASGGGLASMPGSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLISQESCEKKGFLSAPQSLLED 800
gnomAD_SAV:     G#CR #LN    LG #PRYTPLP    R S VNL C    VMNA QT  H N Q IFFA   #N   VS# SSCG AF GR I  I R    L*T   G
Conservation:  7759937742743574436412432322113524142734463574345679774536764464074359747663746463232341344444313232
STMI:          MMMMMMMMMMMMM                                                                                       
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHH  HHHHHH                         EEEEEEEE       EE                         HHH   
SS_SPIDER3:    H HHHHHHHHHHHH H H   HHHHHH     E      E       E    EEEEEEE       EEEE                              
SS_PSSPRED:    HHHHHHHHHHHHHHHHHH   HHHHHHH                          EEEEE                                         
DO_DISOPRED3:    D                                                                         DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                       DDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            KKEPFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSN 900
gnomAD_SAV:      DS  *K L  M  H   T  SSIRS R  N IS  S# P      H    V T  P   GF   AA D V   TH R  S RHYMLH H     LD S
Conservation:  2132326333333333333333333333333333333333333000033333333333333333333333333333333333333333333333333333
SS_PSIPRED:        HH                                      HHHH  HHHHHHHHH                                 EEE     
SS_SPIDER3:                                     EEEEE     HHHHHHHHHHHHHHH                          E       EEE     
SS_PSSPRED:                                               HHHHHHHHHHHHHHH                                   EE     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                 D       D            
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD          D           DDDDDDDDD                                   
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   DDD  DD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDD

                       10        20        30 
AA:            ATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK 931
gnomAD_SAV:         TV  Q D   E   S    L     *
Conservation:  3333333333333333333333333333333
SS_PSIPRED:                                   
SS_SPIDER3:                                   
SS_PSSPRED:    HHH                            
DO_DISOPRED3:   D     DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DD  DDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD