Q9Y5H8  PCDA3_HUMAN

Gene name: PCDHA3   Description: Protocadherin alpha-3

Length: 950    GTS: 1.6e-06   GTS percentile: 0.491     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 5      gnomAD_SAV: 640      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLFSWREDPGAQCLLLSLLLLAASEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSA 100
BenignSAV:                                                                 Q                                       
gnomAD_SAV:        #Q HARG#   V     E WK  RR #R#FI  #D QRN    MTR P# D EQ MSGQL       RE M L RH DV LM  W  L  Q*#QR 
Conservation:  1100000000000010021110121021243242427532263135334455242213311414331222011142331344132512144441381121
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:             HHHHHHHHHHHHHHHHHHH       HHHH   EE  HHHHHH   HHHHHH  EEEE       EEEE    EEEE     HHHH     
SS_SPIDER3:                 HHHHHHHHHHHHHHH  EEEEE HH     E  HHHHH    HHHH    EEEE      EEEEE    EEEE     HHHH     
SS_PSSPRED:              HHHHHHHHHHHHHHHH        HHHH     EE HHHHHH   HHHHHHH EEEEE     EEEEE    EEEE     HHHH     
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ECSIHLEVIVDRPLQVFHVEVEVKDINDNAPVFPMAVKNLFISESRQPGSRFSLEGASDADIGTNSLLTYSLDSTEYFTLDVKRNDEEIKSLGLVLKKNL 200
gnomAD_SAV:    DR   V   M  #  FLRG # L G     S VLVT N Q  YQ#LKL  P    SP G ATR KW   F     K   M #    G   PPRFMW  #V
Conservation:  1523144434215213333341617344316161110003042721113213251160718331542225152133371421111111100316351316
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE            EEEEEEE                    HH   EEE      EEEEEE      EEHHHHH    
SS_SPIDER3:      EEEEEEEEE   EEEEEEEEEEE           EEEEEEEEEE     EE              EEEE      EEEEEE      E HEEEEEE  
SS_PSSPRED:     EEEEEEEEE    EEEEEEEEEEE            EEEEEE                                   EEE          HHHHHH   
DO_DISOPRED3:                             D                                                              DDDDDDDD D
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            NREDTPKHYLLITAIDGGKPELTGTTQLKITVLDVNDNAPAFERTIYKVRLLENAPNGTLVVTVNATDLDEGVNKDIAYSFNTDMSADILSKFHLDPVNG 300
BenignSAV:                                                                                             T           
gnomAD_SAV:     #  SL D*    T E R SV  CMAK E I S    K##   W  C   SF KVT D PA I# V   H R  R  S   KK #L GT *  R      
Conservation:  5771121216252519463523363205060528376417171312612140842003314214172819261732417130101110000170531038
SS_PSIPRED:          EEEEEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEE         EEEEEEE     HHHHH EEE     
SS_SPIDER3:          EEEEEEEEE      EEEEEEEEEEEEE       E   EEEEEE        EEEEEE          EEEEEEE    HHHHHHEEE     
SS_PSSPRED:         HHHHHHHHHEE        EEEEEEEEEE           EEEEEEE       EEEEEE           EEEE      HHHHH         
DO_DISOPRED3:     D                                                                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                              N       N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            QISVKGNIDFEESKSYEIQVEATDKGNPPMSDHCTVLLEIVDINDNVPELVIQSLSLPVLEDSPLSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVST 400
BenignSAV:                      V                                                                                  
gnomAD_SAV:         D MY Q NQ#CDVEI  M#   T IL  SRI F* MH     T     *     S V#     VS  NM EHN    RH  F  #SRL IQ    
Conservation:  1514120575910122251525182601331435242526282774172413332112527431034354353418191305413130302013515113
SS_PSIPRED:    EEEEE         EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE 
SS_SPIDER3:    EEEEEEE       EEEEEEEEEE      E EEEEEEEEEE       EEEEE  E          EEEEEEE E        EEEEE     EEEEE 
SS_PSSPRED:    EEEEE          EEEEEEEEE        EEEEEEEEEEE      EEEEE            EEEEEEEEEE       EEEEE       EEEE 
DO_DISOPRED3:                                              DDDDDDDDDDDDDD                                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                     DDDDDDD   D                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            FKNYYSLVLDSPLDRESVSAYELVVTARDGGSPSLWATASVSVEVADVNDNAPAFSQSEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRVG 500
BenignSAV:                                            I                                                            
gnomAD_SAV:    IRSC#   M  A  H #ML C*    VQY#D S  #T  GEFM L  AKN  TT  #Y C   LR K A#  Q L  FTWET T*D VPMFCL   P#L 
Conservation:  3232444351216636111051415241425143423111303164834433414111111313223211411302315062221243131512021002
SS_PSIPRED:        EEEE            EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE     
SS_SPIDER3:       EEEEEE          EEEEEEEEEE        EEEEEEEEE            EEEEEE        EEEEEEEE      EEEEEEEEEE    
SS_PSSPRED:       EEEEE            EEEEEEEEE        EEEEEEEEEE           EEEEEEE       EEEEEE     H H   EEEEEE     
DO_DISOPRED3:                                                   DDDD                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                              DD                       

                       10        20        30        40        50        60        70        80        90     
AA:            ERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLMPRVGGIGGAVSELVPRSVGAGHVVAKVRAVDAD 600
gnomAD_SAV:    QCV  N L  Q# NDR  E RL   GKVG  L    ECE#DMR  S KLM K #A EKS# T  V  R#M VVCCTAR   SL L V  MI#T    #TE
Conservation:  1012111323221342312112453732113131312142312321322342534252543151321211211112121112123123233454242413
SS_PSIPRED:     EE  EEEEEE     EEE     HHHHHEEEEEEEEEE        EEEEEEEEE       EE            EEEE       EEEEEEEEEE  
SS_SPIDER3:     EE EEEEEEE     EEEE    HHHHHH EEEEEEEE        EEEEEEEEEE      EEE          EEEE         EEEEEEEE   
SS_PSSPRED:        EEEEEEE    EEEE     HHHHHHHHHEEEEEE        EEEEEEEEEE                   EEEE        EEEEEEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            SGYNAWLSYELQPGTGGARIPFRVGLYTGEISTTRALDEVDAPRHRLLVLVKDHGEPSLTATATVLVSLVESGQAPKASSQASAGATGPEAALVDVNVYL 700
gnomAD_SAV:    *A #SR L*G  #AI#SV# L G   C R   M G V    DA#R#P M   ##R H   TM#   ML #    TSNTWC P T  M L  V  GI G F
Conservation:  3333334131411111111154133123725222313231211130214241544231424132313122221111121111011101011121233346
STMI:                                                                                                           MMM
SS_PSIPRED:      HHEEEEEEE          EEEE    EEEE            EEEEEEEE      EEEEEEEEEEE                  HHHH   HHHHH
SS_SPIDER3:       EEEEEEEE E      E EEE      EEEEE   H  HH   EEEEEEE  E   EEEEEEEEEEEE                 HHH    HHHHH
SS_PSSPRED:        EEEEEEEE          EEE    EEEE            EEEEEEEE       EEEEEEEEEE                         EEEHH
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDD          
DO_SPOTD:                                                                                DDDDDDDDDDDDDDDDDD        
DO_IUPRED2A:                                                                                DDDDDD D               

                       10        20        30        40        50        60        70        80        90     
AA:            IVAICAVSSLLVLTLLLYTALRCSAPPTEGDCGPGKPTLVCSSAVGSWSYSQQRQQRVCSGEGLPKTDLMAFSPSLPPCPISRDREEKQDVDVDLSAKPR 800
BenignSAV:                                                               Y                                         
gnomAD_SAV:      DV E #R   F     I  Q  V  A#S S QA #P   CR#L#  LN  HKH  LY EDEVL  NF   T# P LGATRQ S   EGAA V  TERQ
Conservation:  4435325224453233232324411120121222113122221113331121131222123311121221212311210000000000111111111111
STMI:          MMMMMMMMMMMMMMMMMM                                                                                  
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHH               EEE            EEEEEEE        EEEE                            
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHH               E E      E     EEEEEEE      E  E E                            
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH                            HHHH HHH         EEEE                            
DO_DISOPRED3:                              D D DDDDDDDDDDDD  DDDDDD                      DDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                      DDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                              DD    DDD                      D D        D    DDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR 900
gnomAD_SAV:         #H  DFP  RVNGA P #Q D  W A  R E RCRAL N A#G  V       SV I         E D RR CSH    NI  VAV   TF  W
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:             HHH    EEE  HHHH                                                              EE           
SS_SPIDER3:                     E   HHH                                                               EE      EEE  
SS_PSSPRED:             HHHH        HHHH                                                              EE           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                   D                 DDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD        DDDDDDDDD         DDDD   D
DO_IUPRED2A:   DDDDDDDDDDD         DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50
AA:            QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ 950
gnomAD_SAV:      #  G TGN  Y I S M  I#    TRR  T    N  RK M E    
Conservation:  11111111111111111111111111111111111111111111111111
SS_PSIPRED:            HH        HHHH           HHHHHHH          
SS_SPIDER3:                                        HH            
SS_PSSPRED:                      HHHHHHHHH       HHHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD