Q9Y5H9  PCDA2_HUMAN

Gene name: PCDHA2   Description: Protocadherin alpha-2

Length: 948    GTS: 2.286e-06   GTS percentile: 0.748     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 3      gnomAD_SAV: 640      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MASSIRRGRGAWTRLLSLLLLAAWEVGSGQLRYSVPEEAKHGTFVGRIAQDLGLELEELVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSA 100
BenignSAV:                             K                                                                           
gnomAD_SAV:      YFT  D  D*AP F#P  V  #KL R K HCA  #  NYC    PF#*  #P #AQ     LQMT E#RRN     MEKRVS A  Q  Q    V # 
Conservation:  2100010101010232221322132133245384628744464487444386452424723336443342225593562645477955447463583332
STMI:          SSSSSSSSSSSSSSSSSSSSSS                                                                              
SS_PSIPRED:              HHHHHHHHHHHHHHHHHH       HHHH   EE  HHHHHH   HHHHHH  EEEE       EEEE    EEEE     HHHHH    
SS_SPIDER3:              HHHHHHHHHHHHHHHHHH  EEEEE HHH    EE  HHHH    HHHH    EEEE      EEEEE    EEEE     HHHHH    
SS_PSSPRED:              HHHHHHHHHHHHHHHH         HHH     EE HHHHHH   HHHHHHH EEEEE     EEEEE    EEEE     HHHHH    
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDD                                                                             
DO_SPOTD:      DDDDDDDD                                                                                            
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ECSIHVEVIVDRPLQVFHVEVEVKDINDNPPIFPMTVKTIRFPESRLLDSRFPLEGASDADIGVNALLSYKLSSSEFFFLDIQANDELSESLSLVLGKSL 200
BenignSAV:          L                                                                                              
gnomAD_SAV:    K G  L      T  F QED#GA  VKHHT V  T  * LW S  K    L #  A    V#    P    FI  KY  RV H   K ND FP  P   P
Conservation:  3654476544445557575473637675538272111413042533233516566682828451852637262134481522112111111517253617
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE            EEEEEEE                    HHH  EEE      EEEEE       EEHHEE     
SS_SPIDER3:      EEEEEEEEE   EEEEEEEEEE            EEEEEEE       EEE             EEEEE      EEEEEEE     E HHHEEEE  
SS_PSSPRED:     EEEEEEEEE    EEEEEEEEEEE            EEEEEE                    HHHHH          EEEE        HHHHHHH   
DO_DISOPRED3:                             D                                                                D       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            DREETAEVNLLLVATDGGKPELTGTVQILIKVLDVNDNEPTFAQSVYKVKLLENTANGTLVVKLNASDADEGPNSEIVYSLGSDVSSTIQTKFTIDPISG 300
gnomAD_SAV:      K#  G DF P    #     RA I MR#T  YA N GS  #P A# A F  S  D A  FEI P     E  R T    #T   PS HA LATE M  
Conservation:  5872223305362629375755354315170757467635172322516151753112523314477618351932516251112211210170531029
SS_PSIPRED:          EEEEEEEEEE      EEEEEEEEEEE            EEEEEEE       EEEEEE          EEEEE      HHHHH EEE     
SS_SPIDER3:          EEEEEEEEE   E  EEEEEEEEEEEE            EEEEEE        EEEEEE         EEEEEEE     HHHHHHEEE     
SS_PSSPRED:     HHHHHHHHHHHEEEE        EEEEEEEEEE           EEEEEEE       EEEEEE          EEEEE      HHHHHHEE      
DO_DISOPRED3:                                                                         DDDDDD                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                 DD D           D                      
CARBOHYD:                                                              N       N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            EIRTKGKLDYEEAKSYEIQVTATDKGTPSMSGHCKISLKLVDINDNTPEVSITSLSLPISENASLGTVIALITVSDRDSGTNGHVTCSLTPHVPFKLVST 400
gnomAD_SAV:        E#R*NC #S  *#V I T  E N  I A     S F#A  E #    V  V H   DKT  #A #VVMP L SNPS#  QA    KLQD  R  F 
Conservation:  2514130585911225451625183614352476352545381785272413232324527552144554453427172423534361513114635225
SS_PSIPRED:    EEEEE         EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE 
SS_SPIDER3:    EEEEEEE       EEEEEEEEEE      E EEEEEEEEE       EEEEEE             EEEEEEE E        EEEEE      EEE  
SS_PSSPRED:    EEEE           EEEEEEEEE        EEEEEEEEEEE      EEEEE            EEEEEEE           EEEE       EEEE 
DO_DISOPRED3:                                              DDDDDDDDDDDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                     D DDD                              D                             D                
CARBOHYD:                                                                   N                                      

                       10        20        30        40        50        60        70        80        90     
AA:            FKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATTSVSIEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAWDADAQENALVSYSLVERRVG 500
gnomAD_SAV:         L     P  ##RM V     I Q #   AV*VNI#A  Q TYM HK# VL  A    CM    LSV  F  L      E G  V   * GDP ER
Conservation:  5444334342315435122150314242425242412131224242545442524133231333244323422332427172513244152324432113
SS_PSIPRED:        EEEEE           EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEEE     
SS_SPIDER3:       EEEEEE          EEEEEEEEEE        EEEEEEEEE            EEEEEE        EEEEEE         EEEEEEEEE    
SS_PSSPRED:       EEEEE            EEEEEEEE         EEEEEEEEEE           EEEEEEE       EEEEEEE    HHH   EEEEEE     
DO_DISOPRED3:                                                   DDDD                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ERALSSYVSVHAESGKVYALQPLDHEEVELLQFQVSARDAGVPPLGSNVTLQVFVLDENDNAPALLAPRAGTAAGAVSELVPWSVGAGHVVAKVRAVDAD 600
gnomAD_SAV:    ### WNSI L   GR  HG   # QK L #V L LRE    L#     MK   S Q K   TRTP VL S  T #  R#V R   VSR   S  ##LY  
Conservation:  2113221112211122211221553622121141414143312352332331314342433151611112121101011120222124323223221423
SS_PSIPRED:     EE  EEEEEE     EEE     HHH EEEEEEEEEEE        EEEEEEEEE       EE            EEEEE      EEEEEEEEEE  
SS_SPIDER3:     EE EEEEEEE     EEEE    HHHHH  EEEEEEEE        EEEEEEEEEE      EEE          EEEE        EEEEEEEEE   
SS_PSSPRED:        EEEEEEE    EEEE     HHHHHHHHEEEEEEE        EEEEEEEEEE                   EEEE        EEEEEEEEEE  
DO_DISOPRED3:                                                                         DD                           
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            SGYNAWLSYELQLGTGSARIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRAWVGAAGSEATLVDVNVYL 700
gnomAD_SAV:     A DV*F *K# RC  R## A #    K VMNM  V N#  FLQY#  #   EQ Q GWA   S  M*   GD  LE T  P*MDVE#  VA MEI#M* 
Conservation:  2325213121111012111014112213235111103211211121525241537241413232314133314212120001001001111122211112
STMI:                                                                                                           MMM
SS_PSIPRED:      HHEEEEEEEEE        EEEE    EEEE           EEEEEEEEE      EEEEEEEEEEE                   HHH  HHHHHH
SS_SPIDER3:       EEEEEEEE E      E EEE      EEEEE   H     E EEEEEEE  E   EEEEEEEEEEEE         H              HHHHH
SS_PSSPRED:        EEEEEEEE          EEE    EEEE            EEEEEEEE       EEEEEEEEEE                         HHHHH
DO_DISOPRED3:                                                                           DDDDDDDDDDDDDDDDD          
DO_SPOTD:                                                                                  DDDDDD DDDDDDDD         
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            IIAICAVSSLLVLTVLLYTALRCSVPPTEGARAPGKPTLVCSSAVGSWSYSQQRRQRVCSGEDPPKTDLMAFSPSLSQGPDSAEEKQLSESEYVGKPRQP 800
BenignSAV:                                                                    L                                    
gnomAD_SAV:     VV * AP PM P M PC    R ML# # VLE R SM  YT   R L  *   QL  # A E#HT   R   #TS  C Y TVQ**#*K   A ERL  
Conservation:  1311224321232112222222112120110111113112221112122021112121121211131231111111101101111111111111111111
STMI:          MMMMMMMMMMMMMMMMMM                                                                                  
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHH               EEE            EEEEEE         EEEE          HHH               
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHH               EEE      E     EEEEEE       E EEEE           HH H             
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH                EE          HHH              EEE                             
DO_DISOPRED3:                                    DD  D   D   DDDDDDDDDDD                   DDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                    DDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                              DD  DDDDDD                 DDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            NPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQE 900
gnomAD_SAV:       #H  DFP  RVNGA P #Q D  W A  R E RCRAL I A#G  V       SV I         E D RR CSH    NI  VAV   MF  Q  
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:           HHH         HHH                                                               EE      EE     
SS_SPIDER3:                       H H                                             E                 EEE      EE    
SS_PSSPRED:                                                                                         EE             
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDD          D   DDDDDDDDDDDDDDD  D  D DD   D      D                 DDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD              D             DDD  DDDD
DO_IUPRED2A:   DDDDDDDDDD      D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        
AA:            PTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ 948
gnomAD_SAV:    #  G VGN  Y I S M  I#    TRR  T    N  RK M E    
Conservation:  111111111111111111111111111111111111111111111111
SS_PSIPRED:                    HHHH           HHHHHHH          
SS_SPIDER3:               E                       H            
SS_PSSPRED:                     HH HHHHHHH       HHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD