Q9Y5I0  PCDAD_HUMAN

Gene name: PCDHA13   Description: Protocadherin alpha-13

Length: 950    GTS: 2.514e-06   GTS percentile: 0.811     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 588      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MLSSWQGGPRPRQLLLWLLILAAWETGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAELVPRLFRVASKRHGDLLEVNLQNGILFVNSRIDREELCGRSA 100
gnomAD_SAV:    T   L A L R    V*F  PSD*K#AGSH  H#       #NLM P   N E # E  M#S # E     R  P IS    T LL YQ   KK GV RV
Conservation:  2100010101010232221322132133245384628744464487444386452424723336443342225593562645477955447463583332
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:             HHHHHHHHHHHHHHHHHHH       HHHH   EE  HHHHHH   HHHHH  EEEEE       EEEE    EEEE     HHHHH    
SS_SPIDER3:                HHHHHHHHHHHHHH H  EEEEE HHH     E HHHHH    HHHH    EEEE      EEEEE    EEEE     HHHH     
SS_PSSPRED:              HHHHHHHHHHHHHHHH         HHH     EE HHHHHH   HHHHHHH EEEEE     EEEEE    EEEE     HHHH     
DO_DISOPRED3:  DDDDDDDDDDDBBBDDDDDDDDDD                                                                            
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ECSIHLEVIVDRPLQVFHVEVKVRDINDNPPIFPESKKRIIIAESRPPETRFPLDGASDADIGVNSALTYRLDPNDYFTLDAQNSLEQMSSLSLVLRKTL 200
gnomAD_SAV:    G RM VKAL  G#  DLLM    S VKNY  V    Q # M VK KTL*     G PTE #VR  *VSI G   #      V KN  H PP L       
Conservation:  3654476544445557575473637675538272111413042533233516566682828451852637262134481522112111111517253617
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE          HHEEEEEEE                    HH    EE      EEEEE       EEHHEEE    
SS_SPIDER3:      EEEEEEEEE    EEEEEEEEE            EEEEEE E       E           H H EEEE      EEEEEEE    EE E EEEEE  
SS_PSSPRED:     EEEEEEEEE    EEEEEEEEEEE            EEEEEE                                   EEE         HHHHHHH   
DO_DISOPRED3:                             DDD                                                              D       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                       DDDD                                            

                       10        20        30        40        50        60        70        80        90     
AA:            DREEIQEHSLLLTASDGGKPELTGTVQLLITILDVNDNAPEFYQSVYKVTVLENAFNGTLVIKLNATDPDDGTNGDIVYSFRRPVWPAVVYAFTINPNNG 300
gnomAD_SAV:      G T*KRNF     GED T VI  A       N   Y  #CC  I E SM AK  S    VRI  I       A T  #LGKA  #   C# I  L S 
Conservation:  5872223305362629375755354315170757467635172322516151753112523314477618351932516251112211210170531029
SS_PSIPRED:          EEEEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEEEE         EEEEEEE     HHHHH EEE     
SS_SPIDER3:          EEEEEEEEE      EEEEEEEEEEEE        E   EEEEEE       EEEEEEE         EEEEEEE     HHHHHHEEE     
SS_PSSPRED:     HHHHHHHHHHHHHE         EEEEEEEEEEE          EEEEEEEE      EEEEEE           EEEE      HHHHHEEEE     
DO_DISOPRED3:                                                                       DDDDD D                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:             D                                                                                         
CARBOHYD:                                                              N       N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            EIRTKGKLDFEEKKLYEISVEAVDKGNIPMAGHCTLLVEVLDVNDNAPEVTITSLSLPIREDTQPSAIIALISVSDRDSGSNGQVTCTLTPHVPFKLVST 400
gnomAD_SAV:    Q G     E K E     YLVPA#T K   TDDR F  #  E S  V    TIFF  HTK NSKLRT   P T F   CC  E     V LQ RL #LPA
Conservation:  2514130585911225451625183614352476352545381785272413232324527552144554453427172423534361513114635225
SS_PSIPRED:    EEEE          EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE 
SS_SPIDER3:     EEEEEE       EEEEEEEEEE      EEEEEEEEEEE        EEEEE             EEEEEEE E        EEEEE      EEEE 
SS_PSSPRED:    EEEE           EEEEEEEEE        EEEEEEEEEEE      EEEEE          HHHEEEEEEE          EEEE       EEEE 
DO_DISOPRED3:                                              DDDDDDDD DDD                                            
DO_SPOTD:                                                                                                          
DO_IUPRED2A:      D                                                 DDD                          DD                

                       10        20        30        40        50        60        70        80        90     
AA:            YKNYYSLVLDSALDRESVSAYELVVTARDGGSPSLWATASVSVGVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSAQDADAQENALVSYSLVERRVG 500
gnomAD_SAV:    #ES       #VQHC    T   ML TPNED S* S MT#  G#  N  YYVL SP S    LL GS Q CYYV   YDRAT T  S#   H*   Q L 
Conservation:  5444334342315435122150314242425242412131224242545442524133231333244323422332427172513244152324432113
SS_PSIPRED:        EEEE            EEEEEEEEE       EEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEEEE     
SS_SPIDER3:       EEEEEE          EEEEEEEEEE        EEEEEEEEE            EEEEEE        EEEEEE E      HEEEEEEEEE    
SS_PSSPRED:       EEEEE            EEEEEEEE         EEEEEEEE             EEEEEEE       EEEEEE     H H   EEEEEE     
DO_DISOPRED3:                                                   DDDD                                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                             DDD                       

                       10        20        30        40        50        60        70        80        90     
AA:            ERALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDSGVPPLGSNVTLQVFVLDENDNAPALLTPGAGSAGGTVSELMPRSVGAGHVVAKVRAVDAD 600
gnomAD_SAV:    KLS  T L#   VNRQ         DKV  *  EM  CNC  #T S KL  HL # # THIS V  RT#   TE   RQ  LQ     QA TR HVMHDE
Conservation:  2113221112211122211221553622121141414143312352332331314342433151611112121101011120222124323223221423
SS_PSIPRED:     EE  EEEEEE     EEEE    HHHHHEEEEEEEEEE        EEEEEEEEE       EE            EEEE       EEEEEEEEEE  
SS_SPIDER3:     EE EEEEEEE     EEEE    HHHHHH EEEEEEEE         EEEEEEEEE       EE         EE  E        EEEEEEEEE   
SS_PSSPRED:        EEEEEEE    EEEE     HHHHHHHHHEEEEEE        EEEEEEEEEE                    EE         EEEEEEEEEE  
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                   DDDDD       DDD                     
CARBOHYD:                                                     N                                                    

                       10        20        30        40        50        60        70        80        90     
AA:            SGYNAWLSYELQLAAVGARIPFRVGLYTGEISTTRPLDEVDAPHHRLLVLVKDHGEPALTATATVLLSLVESGQAPQASSRASAGAVGPEAALVDVNVYL 700
gnomAD_SAV:     C      N*F  T ASS  # S#E  A #  RALS  *     QL   # RY C* # R S A        V    # WT W  SM   #SM GDSI  
Conservation:  2325213121111012111014112213235111103211211121525241537241413232314133324212120001001001111122211112
STMI:                                                                                                           MMM
SS_PSIPRED:      HHEEEEEEEEE        EEEE    EEEE            EEEEEEEE      EEEEEEEEEEE                  HHHH   HHHHH
SS_SPIDER3:       EEEEEEEEEE      E EEE      EEEEEE  H   H   EEEEEEE  E   EEEEEEEEEEEE                   H    HHHHH
SS_PSSPRED:        EEEEEEEEE        EEEE    EEE             EEEEEEEE        EEEEEEEEE                         HHHHH
DO_DISOPRED3:                                                                          DDDDDDDDDDDDDDDDDDD         
DO_SPOTD:                                                                                DDDDDDDDDDDDDDDDDD        
DO_IUPRED2A:                                                                                  DDD                  

                       10        20        30        40        50        60        70        80        90     
AA:            IIAICAVSSLLVLTLLLYTALRCSAPPTEGACAPGKPTLVCSSAAGSWSYSQQRRPRVCSGEGPHKTDLMAFSPSLPPCLGSAEGTGQREEDSECLKEPR 800
gnomAD_SAV:    MTVV EEFC FL RF    G WYL      #WTRD  IVG FI# R CL #L   QK#SF#KS## SE IT NA  L   #F G# R   K    F DRL
Conservation:  1311224321232112222222112120110111113112221112122021112121121211131231111111101100000111111111111111
STMI:          MMMMMMMMMMMMMMMMMM                                                                                  
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHH              EEEE               EEE         EEEE                            
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHHH               EEE      E     EEEEEE       E EEEE                     HH     
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHHH                EE                           EEE                             
DO_DISOPRED3:                                         D DD   D  D DDDD                    DDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                        DDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                                         DDDDDDDDDDD  D           DDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            QPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIR 900
gnomAD_SAV:         #H  DFP  RVNGA P #Q D  W A  R E RCTAL N A#G  V       SV I         E D RR CSH    NI  VAV   TF  Q
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:             HHH         HHH           HHH                                                 EEE     EEE  
SS_SPIDER3:             H H         HHH  HH                                                           EEE     EEEE 
SS_PSSPRED:             HHHH        HHH                                                               EE      EE   
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD               DDDDDDDDDDDDDD                                     DDD
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDD   DDDDDDDDDDDDDDDDDDDD                                       
DO_IUPRED2A:   DDDD DDDDDD       D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50
AA:            QEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ 950
gnomAD_SAV:      #  G TGN  Y I S M  I#    TRR  T    N  RK M E    
Conservation:  11111111111111111111111111111111111111111111111111
SS_PSIPRED:             HH HH    HHH            HHHHHHH          
SS_SPIDER3:              HH                      HHHHH           
SS_PSSPRED:                                      HHHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:        DDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD