Q9Y5I1  PCDAB_HUMAN

Gene name: PCDHA11   Description: Protocadherin alpha-11

Length: 949    GTS: 2.208e-06   GTS percentile: 0.725     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


      BenignSAV: 2      gnomAD_SAV: 642      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MFGFQRRGLGTPRLQLWLLLLEFWEVGSGQLHYSVSEEAKHGTFVGRIAQDLGLELAELVQRLFRVASKTHGDLLEVNLQNGILFVNSRIDREELCGQSA 100
gnomAD_SAV:    V     G*  S *    V   *  QA NS HQCCAP  D  #IVL CT#R  EP RE   P#  W V    A#V GLS RD# S  S  V   * GRRRV
Conservation:  1010000000000010021110121021243242427532263135334455242213311414331222011142331344132512144441381121
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                                       
SS_PSIPRED:              HHHHHHHHHHHHHHHHHH       HHHH   EE  HHHHHH   HHHHHH EEEEE       EEEE    EEEE     HHHHH    
SS_SPIDER3:                HHHHHHHHHHHHHHHH  EEEEE HH     EE HHHHH    HHHH    EEEEE     EEEEE     EEE     HHHH     
SS_PSSPRED:               HHHHHHHHHHHHHHH        HHHH     EE HHHHHH   HHHHHHH HEEEE     EEEEE    EEEE    HHHHHH    
DO_DISOPRED3:  BBBDDDDDDDDDDDDDDDBBDDD                                                                             
DO_SPOTD:      DDDDDDDDDD                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            ECSIHLEVIVDRPLQVFHVNVEVKDINDNPPVFSLREQKLLIAESKQSDSRFPLEGASDADIEENALLTYRLSKNEYFSLDSPTNGKQIKRLSLILKKSL 200
BenignSAV:                                                                                                       Y 
gnomAD_SAV:     FG  VG MLG    L R DM A HVK#  S YWV*K  V VE  E*  #  L #RD  V #K  V  I WV  K C        VR T     F N # 
Conservation:  1523144434215213333341617344316161110003042721113213251160718331642225152133371421111111100316351316
SS_PSIPRED:     EEEEEEEEE    EEEEEEEEEE          HHEEEEEEE                    HHH  EEE      EEEE        EEEEEEE    
SS_SPIDER3:      EEEEEEEEE   EEEEEEEEEE        E   EEEEEE   E      E              EEEE      EEEEE       E EHEE EE  
SS_PSSPRED:     EEEEEEEEE    EEEEEEEEEEE         HHHHHHHH                  HHHHHHHH            E         HHHHHHHH  
DO_DISOPRED3:                             DDD                                                              D   D   
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                       DDDD                                            

                       10        20        30        40        50        60        70        80        90     
AA:            DREKTPELNLLLTATDGGKPELTGTVRLLVQVLDVNDNDPEFDKSEYKVSLMENAAKETLVLKLNATDRDEGVNGEVTYSLMSIKPNGRHLFTLDQNNGE 300
gnomAD_SAV:    N     A SS PK R #E SA I NIWPI  D  A V      N*G   R T  T   N  F QY   * K I E  IF SK VR H KQS AVY  SAK
Conservation:  5771121316252519463523363205060528376417171312612140842003314214172819261732417130111100001705310381
SS_PSIPRED:          EEEEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEEEEEE       EEEEEE       HHH EEE     E
SS_SPIDER3:          EEEEEEEEE      EEEEEEEEEEEE            EEEEEE       EEEEEEE          EEEEEE    HH HHEEEE      
SS_PSSPRED:         HHHHHHHEEE         EEEEEEEEEE            EEEEEE      EEEEEEE          EEEEE      HHH  EEE     E
DO_DISOPRED3:                                                                         DDD D                        
DO_SPOTD:                                                                                                          
DO_IUPRED2A:          DDDDDDDD                            DDDDDD            D   D          DDDD              DD    
CARBOHYD:                                                                      N                                   

                       10        20        30        40        50        60        70        80        90     
AA:            VRVNGTLDYEENKFYKIEVQATDKGTPPMAGHCTVWVEILDTNDNSPEVAVTSLSLPVREDAQPSTVIALISVSDRDSGVNGQVTCSLTPHVPFKLVSTF 400
gnomAD_SAV:    L  S*PV    D L  #  R  #   TAK  RRR ##   G S   S   M    P  P  S*  RIL  M AT S  D#  HMIF     F    M IY
Conservation:  5141205759101222515251826013314352425262827741724133321125274310343543534181913054131303020135151133
SS_PSIPRED:    EEE          EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EEEEEE     EEEEE  
SS_SPIDER3:    EEEEEE       EEEEEEEEEE      EEEEEEEEEEEE       EEEEE             EEEEEEEEE        EEEE       EEEE  
SS_PSSPRED:    EEEE          EEEEEEEEE        EEEEEEEEEEE      EEEEE            EEEEEEEEE        EEEEE       EEEE  
DO_DISOPRED3:                                             D DDDDDD DDD                                             
DO_SPOTD:                                                                                                          
DO_IUPRED2A:     D                D                              DDDDDD                                            
CARBOHYD:         N                                                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            KNYYSLVLDSALDRENVWAYELVVTARDGGSPSLWATARVSVEVADVNDNAPAFAQPEYTVFVKENNPPGCHIFTVSARDADAQENALVSYSLVERRLGD 500
BenignSAV:                      S                                                                                  
gnomAD_SAV:    R # LV  Y S  HQSMSV K AL VGH  LS  G R SIY * TN   H# E  HA H A M# IK  CYYSS   V#VV G #KSP F   A  PVSN
Conservation:  2324443512166361110514152414251434231113031648344334141111113132232114113023150622212431315120210021
SS_PSIPRED:      EEEEEE          EEEEEEEEE       EEEEEEEEEEE            EEEEEEE       EEEEEEEE        EEEEEEE      
SS_SPIDER3:      EEEEEE          EEEEEEEEEE     E EEEEEEEEEE E          EEEEEE        EEEEEEEE      EEEEEEEEEE E   
SS_PSSPRED:      EEEEE            EEEEEEEEE        EEEEEEEEEE           EEEEEEE       EEEEEEE    H H   EEEEE       
DO_DISOPRED3:                                                  DDDD                                                
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                             DD                        

                       10        20        30        40        50        60        70        80        90     
AA:            RALSSYVSVHAESGKVYALQPLDHEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPALLATQAGSAGGAVNKLVPRSVGAGHVVAKVRAVDADS 600
gnomAD_SAV:    SS #  #L DT RC   V  L #YKQ       AR# GE#LQLQG HAA     MEAD  S#     RT  PE S SN GLPWL E  #   M#S   N 
Conservation:  0121113232213423121124537321131313121423123213223425342525431513211121111121211121231232334542424133
SS_PSIPRED:    EE EEEEEEE     EEE     HHHHEEEEEEEEEEE        EEEEEEEEE       EE            EEEE       EEEEEEEEEE   
SS_SPIDER3:    EE EEEEEEE     EEEE    H HHHH EEEEEEEE        EEEEEEEEEE      EEE          E EE        EEEEEEEEE    
SS_PSSPRED:       EEEEEEE    EEEE     HHHHHHHHHEEEEEE        EEEEEEEEEE                    EEE        EEEEEEEEEE   
DO_DISOPRED3:                                                                                                      
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                    DD                                 
CARBOHYD:                                                    N                                                     

                       10        20        30        40        50        60        70        80        90     
AA:            GYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEADSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYLI 700
gnomAD_SAV:    S TP R # S   E SL# # C W     R R GV     LQHDG    AMN RKLV     AM  L  GRA#V QD      RPS T  V LN KGC V
Conservation:  3333341314111111111541331237252223132312111302142415442314241323131222211111211110111010111212333464
STMI:                                                                                                          MMMM
SS_PSIPRED:       EEEEEEEE          EEE    EEEE           EEEEEEEEE      EEEEEEEEEEE         HH       HHHH  HHHHHHH
SS_SPIDER3:      EEEEEEEEEE        EEE      EEEEE   H     EEEEEEEEE  E   EEEEEEEEEEEE                   H    HHHHHH
SS_PSSPRED:       EEEEEEEEE         EEE    EEEE            EEEEEEEE        EEEEEEEEE                         HHHHHH
DO_DISOPRED3:                                                                           DDDDDDDDDDDDDDDD           
DO_SPOTD:                                                                              DDDDDDDDDDDDDDDDDDD         
DO_IUPRED2A:                                                                                 DDD                   

                       10        20        30        40        50        60        70        80        90     
AA:            IAICVVSSLLVLTLLLYTALWWSATPTEGACAPGKPTLVCSRAVGSWSYSQQRRQRVCSEEGPPKTDLMAFSPSLPLGLNKEEEGERQEPGSNHPGQPRQ 800
gnomAD_SAV:    TDT M      PR  MNA   L  M ID   T#E*AK M A#SGR  L*  RTL  L FD S A R F      P     ND# WK *K      E RQ 
Conservation:  4353252244532332323244111211212221131222211133311211312221233111212212123112100000000000000111111111
STMI:          MMMMMMMMMMMMMMMMM                                                                                   
SS_PSIPRED:    HHHHHHHHHHHHHHHHHHHHHHH              EEE           EEEEEEE         EEEE                             
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHHHHH               EEE            EEEEEE       E EEEE                             
SS_PSSPRED:    HHHHHHHHHHHHHHHHHHHHHH                EE          HHHH HH          EEE                              
DO_DISOPRED3:              D             DDDDDDDDD   D  D         D D                    DDDDDDDBBBDDDDDDDDDDDDD   
DO_SPOTD:                                                                                      DDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                                   D                    DDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            PNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVSSATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQ 900
gnomAD_SAV:        #C  DFP  RVNGC P #Q D  Q A  R E RCRAL G A#G  V       SV I         E D RR CCH    NI  VAV   TF  Q 
Conservation:  1111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111
SS_PSIPRED:            HHH     EE  HHH                                                               EEE     EEE   
SS_SPIDER3:                         HH   E                                                           EEE     EEEE  
SS_PSSPRED:                         HHHH                                                             EE     EEE    
DO_DISOPRED3:    DD  DDDDD DDDDDDDDDDD                   DDDDDDDDDDDDDDDDDD                  D                  DDD
DO_SPOTD:      DDDD     DDDDD                              DDDDDDDD                                                
DO_IUPRED2A:   DDDDDDDDDDD      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        5
AA:            EPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNSTTDNSDQ 949
gnomAD_SAV:     #  G TGN  Y I S M  I#    TRR  T    N  RK M E    
Conservation:  1111111111111111111111111111111111111111111111111
SS_PSIPRED:            HH HH    HHHH           HHHHHHH          
SS_SPIDER3:                 E                   H HH            
SS_PSSPRED:                      HH HHHH        HHHHH           
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:        DDDDDDDDDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD