Q9Y5I4  PCDC2_HUMAN

Gene name: PCDHAC2   Description: Protocadherin alpha-C2

Length: 1007    GTS: 1.203e-06   GTS percentile: 0.313     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


            gnomAD_SAV: 466      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MEQAGTRPAATEHPRLRRPMPWLLLLPLLLLLLLLLPGPAASQLRYSVPEEQAPGALVGNVARALGLELRRLGPGCLRINHLGAPSPRYLELDLTSGALF 100
gnomAD_SAV:         SS       P Q  VA    R     F      #E    QCP    HVS V MRKLGL  #  #WL WL   HV  M  R  P  Q   A#  #L
Conservation:  1111111111110101010110010210311111111112133425342662118318636317535332152263344111311221650441149252
STMI:          SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS                                                          
SS_PSIPRED:                 HHH     HHHHHHHHHHHHHH   HHH               EEEHHHHH    HHHH    EEEEE       EEEEE    EEE
SS_SPIDER3:                           HHHHHHHHHHH         EEEE  H      E  HHHHH    HHH     EEEEE      EEEEE      EE
SS_PSSPRED:                          HHHHHHHHHHHHHH                    EEEHHHHHH   HHHH    EEEEE       EEEEE    EEE
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDBBBBBBBBBBBBBBDDDDD                                                               
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                              
DO_IUPRED2A:   DDDDDDDDDDDDD                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            VNERIDREALCEQRPRCLLSLEVLAHNPVAVSAVEVEILDINDNSPRFPRPNYQLQVSESVAPGARFHIESAQDPDVGANSVQTYELSPSEHFELDLKPL 200
gnomAD_SAV:     H#HTE  T   LP   P G K  V SH E   A M       S    S# S E LA      E G Q# R H R   TS   A    L  QLQ    A 
Conservation:  6234379724720112723234433226332213243527376647183112225253723235544156373725243544328173243461732101
SS_PSIPRED:    E     HHHHH     EEEEEEEEE    EEEEEEEEEE             EEEEEE                    HHH  EEEE     EEEEEE  
SS_SPIDER3:    E  E  HHHH      EEEEEEEEE    EEEEEEEEEEE           EEEEEEEEE     EEE    E        EEEEE      EEEEEEE 
SS_PSSPRED:    E    HHHHHH      EEEEEEEEE  EEEEEEEEEEEEE           EEEEEEE      E                           EEE    
DO_DISOPRED3:                                             D                              DDD                       
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                    D DDDD          D D    DD   DDDDDDD        DD D D  

                       10        20        30        40        50        60        70        80        90     
AA:            QENSKVLELVLRKGLDREQAALHHLVLTAVDGGIPARSGTAQISVRVLDTNDNSPAFDQSTYRVQLREDSPPGTLVVKLNASDPDEGSNGELRYSLSSYT 300
gnomAD_SAV:     K  E      L       TV  Y  FA M ED LPCLRKT#   HL   I         #     W V  S      M         S   K      #
Conservation:  0132214355823348692121316374718671725663326261758387928183233835252854316565436295928772765507464424
SS_PSIPRED:        EEEEEEE          EEEEEEEEE        EEEEEEEEEE            EEEEEE        EEEEEEEE        EEEEEEE   
SS_SPIDER3:        EEEEEEE E        EEEEEEEEEE     EEEEEEEEEEEE            EEEEEE       EEEEEEE         EEEEEEEE   
SS_PSSPRED:        HHHHHHHH    HHHHHHHHHHHHHHH       EEEEEEEEEEE           EEEEEEE      EEEEEEE          EEEEE     
DO_DISOPRED3:         D   D                                         DD D D                                         
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                           DDDDDD DDDD      DDDDDDDD  D    DDDDDDDDDDD   DDDDDDDDDDD   
CARBOHYD:                                                                                     N                    

                       10        20        30        40        50        60        70        80        90     
AA:            SDRERQLFSIDASTGEVRVIGGLDYEEASSYQIYVQATDRGPVPMAGHCKVLVDIVDVNDNAPEVVLTDLYSPVPENATPNTIVAVLSVNDQDSGPNRKV 400
gnomAD_SAV:    LEW T   TTN   E    TA      VCAC  C     Q     VD    M N G  K   L  L M   G       R# T TF T S  G  S QN 
Conservation:  2234542824420487524220442533125744668362822433535555647385877384414244455638641246578645518382418446
SS_PSIPRED:     HHHHHHEEE     EEEEE         EEEEEEEEE        EEEEEEEEEE       EEEEEE             EEEEEEEE        EE
SS_SPIDER3:     HHHHHHEEE      EEEEEEE      EEEEEEEEEE      EEEEEEEEEEEE       EEEEE             EEEEEEEEE        E
SS_PSSPRED:     HHHHHHH       EEEEE          EEEEEEEEE       EEEEEEEEEEEE      EEEEE            EEEEEEE E         E
DO_DISOPRED3:                                                                DDDDD DD                              
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                     D DDDDD         D DDDDD         D 

                       10        20        30        40        50        60        70        80        90     
AA:            SLGLEATLPFRLNGFGNSYTLVVSGPLDRERVAVYNITVTATDGGIPQLTSLRTLKVEISDINDNPPSFLEDSYSIYIQENNLPGVLLCTVQATDPDEKE 500
gnomAD_SAV:      D GS    Q       CI    S  EQ W   C  M   I      FIFPC  RA    #S   RC      AV TR  SF  L         #G   
Conservation:  1514211399263443539464634189691121856462728392744442335161639698759091211333351888135334215271826133
SS_PSIPRED:    EEE      EEEEE   EEEE            EEEEEEEEE        EEEEEEEEEE            EEEEEEE       EEEEEEEE      
SS_SPIDER3:    EEEE     EEEEEE  EEEEEE          EEEEEEEEEE       EEEEEEEEEEE           EEEEEEE       EEEEEEEE      
SS_PSSPRED:    EEEE      EEEEE  EEEEE            EEEEEEEE           EEEEEEEE            EEEEEEE      EEEEEE        
DO_DISOPRED3:                                                                 DDDD D                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                            DD        D
CARBOHYD:                                         N                                                                

                       10        20        30        40        50        60        70        80        90     
AA:            NAEVTYSLLEREIQGLPVTSYVSINSASGSLYAVNSFDYEKFREFFVTVEAQDKGSPPLSSTVTANVYVVDMNDHAPHILYPTSTNSSAAFEMVPRTAPA 600
gnomAD_SAV:       L   F G   R    NP       G  I SI F N G  Q  S  L   NE    RG I ATSI M     Y S       #SL    K   Q  L#
Conservation:  7617392531012152344435253413924493248969356261536383929183674234424462917752706427221435122525332412
SS_PSIPRED:     EEEEEEEE      EE EEEEEEE     EEEEE   HHHEEEEEEEEEEE         EEEEEEEEE       EEE           EE       
SS_SPIDER3:    EEEEEEEEEE EE  EE EEEEEEE     EEEEE  EHH HEEEEEEEEEEE        EEEEEEEEE       EEEE         EEE       
SS_PSSPRED:      EEEEEE           EEEEEE    EEEEE    HHHHEEEEEEEEEE         EEEEEEEEE                              
DO_DISOPRED3:                                                      D    D                                          
DO_SPOTD:                                                                                                          
DO_IUPRED2A:   DDDDD                                                                                               
CARBOHYD:                                                                                           N              

                       10        20        30        40        50        60        70        80        90     
AA:            GYLVTKVIAMDSDSGQNAWLFYHLAQTSDLDLFKVELHTGEIRTTRKMGDESGSTFNLTVVVRDNGEPSLSASVAITVAVVDRVSKILPDTQRHVKSPRT 700
gnomAD_SAV:        I  V      R S R   R  H    EP  A      V A          A SV M  *     L     TV   L VG  R  H    Y RN WA
Conservation:  5276666362927372998737051323322562511339864536241333222324262637471736665334252535124322742120131020
SS_PSIPRED:      EEEEEEEEE    HHHHHHHEEE        EE       EEEEE        EEEEEEEEE      EEEEEEEEEEE  HHH              
SS_SPIDER3:      EEEEEEEE      EEEEEEEEEE      EEE      EEEEEE         EEEEEEEE  E   EEEEEEEEEEE                   
SS_PSSPRED:     EEEEEEEEEE     HHHHHHHHHH       EEE     E              EEEEEEEE       EEEEEEEEEE                   
DO_DISOPRED3:                                                                                         DDDDDDDDDDD  
DO_SPOTD:                                                                                                  D  D    
DO_IUPRED2A:                                              DD                                                       
CARBOHYD:                                                              N                                           

                       10        20        30        40        50        60        70        80        90     
AA:            YSEITLYLIIALSTVSFIFLLTIIILSIIKCYRYTAYGTACCGGFCGVRERSPAELYKQANNNIDARIPHGLKVQPHFIEVRGNGSLTKTYCYKACLTAG 800
gnomAD_SAV:     Y V    V T N M  ML   V  F     HCHAV#D  Y     RLG K        D IS     LY   A      I# #   S     #T   T 
Conservation:  3511544744573345457443543422253222212211362126214521415111211020102222321324324653436543445254434323
STMI:                  MMMMMMMMMMMMMMMMMMMMM                                                                       
SS_PSIPRED:      HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                   HHHHHHHH                 EE          EEEEEEEE   
SS_SPIDER3:        HHHHHHHHHHHHHHHHHHHHHHHHHHH HH                   HHHHHH                  EEEE     E E EEEEEE    
SS_PSSPRED:       HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                   HHHHHH                  EEEE         EEEEEEE   
DO_DISOPRED3:                                             DDDDDDDDDDDDDDDDDDDDDDDDDD                               
DO_SPOTD:                                                                                                          
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SGSDTFMFYNTGAQTGPGPSGAQAAVTDSRNLTGQSGQNAGNLIILKNEAVSQNEPRQPNPDWRYSASLRAGMHSSVHLEEAGILRAGPGGPDQQWPTVS 900
gnomAD_SAV:    # NY  #  DA #   A LL # T    RGIV     R S      QD  I    RL     #H  DFP  RVNGC Y #Q D  W A  R E RCTAL 
Conservation:  3342223324231233242113213211122132265221223323224323336451324545454463223124333433433344353445435434
SS_PSIPRED:         EEEEE          HHH                   EEEE                                HHH                   
SS_SPIDER3:        EEEEE             HH                HHHHHHH                                     E               
SS_PSSPRED:        EEEEEE                                                                                          
DO_DISOPRED3:                 DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD DDDDDDDDDDDDDDDDDDDDDDDD                   
DO_SPOTD:                     D DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                         
DO_IUPRED2A:             D      DDDDDDDDDDDDDDDDDD DDDD  DDDDDDDDDDDDDDDDDDDDDDDDDDD D       DDDDDDDDDDDDDDDDDDDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            SATPEPEAGEVSPPVGAGVNSNSWTFKYGPGNPKQSGPGELPDKFIIPGSPAIISIRQEPTNSQIDKSDFITFGKKEETKKKKKKKKGNKTQEKKEKGNS 1000
gnomAD_SAV:    G A#G  V       SV I         E D RR CSH    NI  VAV   TF  W  #  G TGN  Y I S M  I#    TRR  T    N  RK 
Conservation:  1211111131123333432322531524342444123755345453343436444555342313156669979799775976666511332334444321
SS_PSIPRED:                                                EE      EEE                    HHH            HHHHHH    
SS_SPIDER3:                          E   E               H EEE     EEE                                             
SS_PSSPRED:                                                EE                                             HHH      
DO_DISOPRED3:     DDDDDDDDDDDDDDDDD    DD    D     D               DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:        DDDDDDDDDD                                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD

                      
AA:            TTDNSDQ 1007
gnomAD_SAV:    M E    
Conservation:  1221210
SS_PSIPRED:           
SS_SPIDER3:           
SS_PSSPRED:           
DO_DISOPRED3:  DDDDDDD
DO_SPOTD:      DDDDDDD
DO_IUPRED2A:   DDDDDDD