Q9Y6N9  USH1C_HUMAN

Gene name: USH1C   Description: Harmonin

Length: 552    GTS: 3.334e-06   GTS percentile: 0.940     


gnomAD     SWISS-MODEL     InterPro     ProViz     PDB    


PathogenicSAV: 3      BenignSAV: 7      gnomAD_SAV: 366      SnvSAV


                       10        20        30        40        50        60        70        80        90     
AA:            MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHQTMDVAVLVGDLKLVINEPSRLPLFDAIRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRLHPEGLGL 100
PathogenicSAV: V                             Q                                                                     
BenignSAV:                                      R                                                                  
gnomAD_SAV:          #   N AG  V   SG EH HNA Q# R  # M MFL E  VLVS R CMH    VWLPS   QKM  E  N WCF      # YG QSK  C 
Conservation:  7012011110017437576799997776696364537442756776646664927746774569979979745993499566999699777923659976
SS_PSIPRED:      HHHHHHHHHHHHHH   HHHHHHHHHHHHH HHH  HHHHH  EEEEE    EEE                           EEEEEEE        E
SS_SPIDER3:      HHHHHHHHHHHHH    HHHHHHHHHHHHHHHH   HHHHHH  EEEE        HHH  H       H            EEEEEEEE       E
SS_PSSPRED:     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEE        HHHHHH     HHHH H          EEEEEE       EE
DO_DISOPRED3:  DDDDDD DDDDDD                                                                                       
DO_SPOTD:      DDD                                                                       DDDDDD                    
DO_IUPRED2A:                                                                                                       

                       10        20        30        40        50        60        70        80        90     
AA:            SVRGGLEFGCGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRTKKTVSIKVRHIGLIPVKSSPDEPLTWQYVDQFVSESGGVRGSLG 200
PathogenicSAV:                                                 K                                                   
BenignSAV:                                  I                                                                      
gnomAD_SAV:      L  VA D    T      VHGG#DR  I Y  AW S S V FR QQ  V  VPSEN MP    Y A       L#K V   S   V WK   M*SC S
Conservation:  4579947736975693544466523247537974777774553674777554954745475477544755746423365747654576463343122251
SS_PSIPRED:    EEEE      EEEEEEE    HHHHH      EEEEE  EE     HHHHHHHHH   EEEEEEEE                EE                
SS_SPIDER3:    EEEE       EEEEEEEE   HHH       EEEEE  EE     HHHHHHHH     EEEEEEEE  E                              
SS_PSSPRED:    EEE       EEEEEEE              EEEEEE  EE     HHHHHHHHH   EEEEEEEE                                  
DO_DISOPRED3:                                                                                DDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                                                                                            DDDDDDDDDDDDDD
DO_IUPRED2A:                                                                                                  DD DD

                       10        20        30        40        50        60        70        80        90     
AA:            SPGNRENKEKKVFISLVGSRGLGCSISSGPIQKPGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKSSRSLTISIVAAAGRELFMTD 300
gnomAD_SAV:    P R Q K  TN S   E  #     L  # M      T RA # #     E  L    FKI  IN    Y         GRHTQ  FMAV G WQPL I 
Conservation:  5144200467747456363577749576772657775474573374579797327957577682473235624551466546496413245653398342
SS_PSIPRED:              EEEEEEE     EEEEE        EEEEEE    HHHHH      EEEEE  EE     HHHHHHHHH    EEEEEEE          
SS_SPIDER3:             EEEEEEEE   E EEEEE       EEEEE E    HHHHH      EEEEE  EE     HHHHHHHHH    EEEEEEE         H
SS_PSSPRED:             EEEEEEE      EEEE         EEEEE                EEEEE  EE     HHHHHHHHH     EEEEEE          
DO_DISOPRED3:  DDDDDDD                                                                                            D
DO_SPOTD:      DDDDDDD                                                                                             
DO_IUPRED2A:   DDD                                                                                                 
MODRES_P:                        S                                                                                 

                       10        20        30        40        50        60        70        80        90     
AA:            RERLAEARQRELQRQELLMQKRLAMESNKILQEQQEMERQRRKEIAQKAAEENERYRKEMEQIVEEEEKFKKQWEEDWGSKEQLLLPKTITAEVHPVPLR 400
gnomAD_SAV:    # W T VG H  #Q#QI #H Q ER CSRVV   PK  WK K * D*N E   GIHG  LK M          R V  D    P     V    YLL  #
Conservation:  3665120226733866671653263545553468542542844844463366348543653281319342144858885243222123241320220501
SS_PSIPRED:    HHH HHHHHHHHHHHHHH     HHH   HHHHHHHHHHHHHHHHHHHHHHH HHHHHHHHHHHHHHHHHH HHH     HHH      EE         
SS_SPIDER3:    HHHHHHHHHHHHHHHHHHH HHH H     HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                      
SS_PSSPRED:     HHHHHHHHHHHHHHHHH             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH                              
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_SPOTD:                 D  DDDDDDDDDDDDDDDDDDD   D  DD DDD   D  DDDDD DDDDDDD DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD
DO_IUPRED2A:                              DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD   D                            DDDDD

                       10        20        30        40        50        60        70        80        90     
AA:            KPKYDQGVEPELEPADDLDGGTEEQGEQDFRKYEEGFDPYSMFTPEQIMGKDVRLLRIKKEGSLDLALEGGVDSPIGKVVVSAVYERGAAERHGGIVKGD 500
BenignSAV:                   T     S                                                             S                 
gnomAD_SAV:    T   E VA S  K T N NRSM     R IQE   D  R* #   DR V  H Q  C#RRKRF E S  SDANF T#N AI S   WRT AQYS V EV 
Conservation:  1113222113202122222222222221431320123382326332430432322422221504421222411342542513123224432225333346
SS_PSIPRED:                                 HHH       HHH         EEEEEEEE      EEEE         EEEEEE    HHHHH       
SS_SPIDER3:                              H  HHH                    EEEEEEE      EEEEE       EEEEEEEE   HHHHH   E   
SS_PSSPRED:                                                       EEEEEEEE      EEEE         EEEEEEE    HHHH      E
DO_DISOPRED3:  DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                       
DO_SPOTD:      DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                 
DO_IUPRED2A:   DDDDDDDDDDDDDDDDDDDDDDDDDDDDDDDD                                                                    

                       10        20        30        40        50  
AA:            EIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVCPPKEYDDELTFF 552
BenignSAV:                       D          R                      
gnomAD_SAV:    KTTTT S TM   NM KVDTG  #G   VE#G EF  VIRHA    GA I  
Conservation:  3432332102140131322214025631653323333214335133531213
SS_PSIPRED:    EEEEE  EE     HHHHHHHHHHHHH     EEEEEEE             
SS_SPIDER3:    EEEEE  EEE   EHHHHHHHHHHHHH    EEEEEEEEE            
SS_PSSPRED:    EEEEE  EE     HHHHHHHHHHHHHH   EEEEEEEE             
DO_DISOPRED3:                                                      
DO_SPOTD:                                                 DDDDDDDDD
DO_IUPRED2A: