Accession ID Name Pfam Type
PF00392 Bacterial regulatory proteins, gntR family domain

This family of regulatory proteins consists of the N-terminal HTH region of GntR-like bacterial transcription factors. At the C-terminus there is usually an effector-binding/oligomerisation domain. The GntR-like proteins include the following sub-families: MocR, YtrR, FadR, AraR, HutC and PlmA, DevA, DasR [1-2][4][5]. Many of these proteins have been shown experimentally to be autoregulatory, enabling the prediction of operator sites and the discovery of cis/trans relationships [3]. The DasR regulator has been shown to be a global regulator of primary metabolism and development in Streptomyces coelicolor [5].

Pfam Range: 13-76 DPAM-Pfam Range: 1-81
Uniprot ID: Q01856
Pfam Range: 11-74 DPAM-Pfam Range: 10-79
Uniprot ID: P0ACL9
Pfam Range: 28-90 DPAM-Pfam Range: 21-93
Uniprot ID: Q0PWM1

References

1: PlmA, a new member of the GntR family, has plasmid maintenance functions in Anabaena sp. strain PCC 7120. Lee MH, Scherer M, Rigali S, Golden JW; J Bacteriol 2003;185:4315-4325. PMID:12867439

2: Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies. Rigali S, Derouaux A, Giannotta F, Dusart J; J Biol Chem 2002;277:12507-12515. PMID:11756427

3: Extending the classification of bacterial transcription factors beyond the helix-turn-helix motif as an alternative approach to discover new cis/trans relationships. Rigali S, Schlicht M, Hoskisson P, Nothaft H, Merzbacher M, Joris B, Titgemeyer F; Nucleic Acids Res 2004;32:3418-3426. PMID:15247334

4: A new GntR family transcriptional regulator in streptomyces coelicolor is required for morphogenesis and antibiotic production and controls transcription of an ABC transporter in response to carbon source. Hillerich B, Westpheling J; J Bacteriol. 2006;188:7477-7487. PMID:16936034

5: The sugar phosphotransferase system of Streptomyces coelicolor is regulated by the GntR-family regulator DasR and links N-acetylglucosamine metabolism to the control of development. Rigali S, Nothaft H, Noens EE, Schlicht M, Colson S, Muller M, Joris B, Koerten HK, Hopwood DA, Titgemeyer F, van Wezel GP; Mol Microbiol. 2006;61:1237-1251. PMID:16925557

6: Structural characterization of GntR/HutC family signaling domain. Gorelik M, Lunin VV, Skarina T, Savchenko A; Protein Sci. 2006;15:1506-1511. PMID:16672238