Accession ID Name Pfam Type
PF00644 Poly(ADP-ribose) polymerase catalytic domain family

Poly(ADP-ribose) polymerase catalyses the covalent attachment of ADP-ribose units from NAD+ to itself and to a limited number of other DNA binding proteins, which decreases their affinity for DNA. Poly(ADP-ribose) polymerase is a regulatory component induced by DNA damage. The carboxyl-terminal region is the most highly conserved region of the protein. Experiments have shown that a carboxyl 40 kDa fragment is still catalytically active [2].

Pfam Range: 376-577 DPAM-Pfam Range: 365-582
Uniprot ID: Q9UGN5
Pfam Range: 312-528 DPAM-Pfam Range: 304-347,378-538
Uniprot ID: Q09525
Pfam Range: 517-689 DPAM-Pfam Range: 493-693
Uniprot ID: Q8BZ20

References

1: Structure of the catalytic fragment of poly(AD-ribose) polymerase from chicken. Ruf A, Mennissier de Murcia J, de Murcia G, Schulz GE; Proc Natl Acad Sci U S A 1996;93:7481-7485. PMID:8755499

2: The carboxyl-terminal domain of human poly(ADP-ribose) polymerase. Overproduction in Escherichia coli, large scale purification, and characterization. Simonin F, Hofferer L, Panzeter PL, Muller S, de Murcia G, Althaus FR; J Biol Chem 1993;268:13454-13461. PMID:8390463

3: Inhibitor and NAD+ binding to poly(ADP-ribose) polymerase as derived from crystal structures and homology modeling. Ruf A, de Murcia G, Schulz GE; Biochemistry 1998;37:3893-3900. PMID:9521710