Accession ID Name Pfam Type
PF01008 Initiation factor 2 subunit family family

This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes, initiation factor 2B subunits 1 and 2 from archaebacteria and some proteins of unknown function from prokaryotes. Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. Members of this family have also been characterised as 5-methylthioribose- 1-phosphate isomerases, an enzyme of the methionine salvage pathway. The crystal structure of Ypr118w, a non-essential, low-copy number gene product from Saccharomyces cerevisiae, reveals a dimeric protein with two domains and a putative active site cleft [2].

Pfam Range: 156-452 DPAM-Pfam Range: 256-463
Uniprot ID: Q09924
Pfam Range: 49-337 DPAM-Pfam Range: 135-352
Uniprot ID: O31662
Pfam Range: 27-333 DPAM-Pfam Range: 150-349
Uniprot ID: Q28690

References

1: Archaeal translation initiation revisited: the initiation factor 2 and eukaryotic initiation factor 2B alpha-beta-delta subunit families. Kyrpides NC, Woese CR; Proc Natl Acad Sci U S A 1998;95:3726-3730. PMID:9520434

2: Crystal structure of yeast Ypr118w, a methylthioribose-1-phosphate isomerase related to regulatory eIF2B subunits. Bumann M, Djafarzadeh S, Oberholzer AE, Bigler P, Altmann M, Trachsel H, Baumann U; J Biol Chem 2004; [Epub ahead of print] PMID:15215245