Accession ID Name Pfam Type
PF01207 Dihydrouridine synthase (Dus) family

Members of this family catalyse the reduction of the 5,6-double bond of a uridine residue on tRNA. Dihydrouridine modification of tRNA is widely observed in prokaryotes and eukaryotes, and also in some archae. Most dihydrouridines are found in the D loop of t-RNAs. The role of dihydrouridine in tRNA is currently unknown, but may increase conformational flexibility of the tRNA. It is likely that different family members have different substrate specificities, which may overlap. Dus 1 (Swiss:Q9HGN6) from Saccharomyces cerevisiae acts on pre-tRNA-Phe, while Dus 2 (Swiss:P53720) acts on pre-tRNA-Tyr and pre-tRNA-Leu. Dus 1 is active as a single subunit, requiring NADPH or NADH, and is stimulated by the presence of FAD [1]. Some family members may be targeted to the mitochondria and even have a role in mitochondria [1].

Pfam Range: 1-346 DPAM-Pfam Range: 1-384
Uniprot ID: Q50049
Pfam Range: 13-321 DPAM-Pfam Range: 1-324
Uniprot ID: P44965
Pfam Range: 14-327 DPAM-Pfam Range: 2-333
Uniprot ID: P72872

References

1: A conserved family of Saccharomyces cerevisiae synthases effects dihydrouridine modification of tRNA. Xing F, Martzen MR, Phizicky EM; RNA 2002;8:370-381. PMID:12003496