Accession ID Name Pfam Type
PF02002 TFIIE alpha subunit family

The general transcription factor TFIIE has an essential role in eukaryotic transcription initiation together with RNA polymerase II and other general factors. Human TFIIE consists of two subunits TFIIE-alpha Swiss:P29083 and TFIIE-beta Swiss:P29084 and joins the pre-initiation complex after RNA polymerase II and TFIIF [1]. This family consists of the conserved amino terminal region of eukaryotic TFIIE-alpha [2] and proteins from archaebacteria that are presumed to be TFIIE-alpha subunits also Swiss:O29501 [3].

Pfam Range: 16-123 DPAM-Pfam Range: 14-99
Uniprot ID: P29083
Pfam Range: 11-114 DPAM-Pfam Range: 13-90
Uniprot ID: O29501
Pfam Range: 11-118 DPAM-Pfam Range: 3-98
Uniprot ID: P36100

References

1: Structural motifs and potential sigma homologies in the large subunit of human general transcription factor TFIIE. Ohkuma Y, Sumimoto H, Hoffmann A, Shimasaki S, Horikoshi M, Roeder RG; Nature 1991;354:398-401. PMID:1956403

2: Identification of two large subdomains in TFIIE-alpha on the basis of homology between Xenopus and human sequences. Ohkuma Y, Hashimoto S, Roeder RG, Horikoshi M; Nucleic Acids Res 1992;20:5838-5838. PMID:1454543

3: The complete genome sequence of the hyperthermophilic, sulphate- reducing archaeon Archaeoglobus fulgidus. Klenk HP, Clayton RA, Tomb JF, White O, Nelson KE, Ketchum KA, Dodson RJ, Gwinn M, Hickey EK, Peterson JD, Richardson DL, Kerlavage AR, Graham DE, Kyrpides NC, Fleischmann RD, Quackenbush J, Lee NH, Sutton GG, Gill S, Kirkness EF, Dougherty BA, McKenney K Nature 1997;390:364-370. PMID:9389475