Accession ID Name Pfam Type
PF02362 B3 DNA binding domain family

This is a family of plant transcription factors with various roles in development, the aligned region corresponds the B3 DNA binding domain as described in [1] this domain is found in VP1/AB13 transcription factors [2]. Some proteins also have a second AP2 DNA binding domain Pfam:PF00847 such as RAV1 Swiss:Q9ZWM9 [1]. DNA binding activity was demonstrated by [3].

Pfam Range: 572-674 DPAM-Pfam Range: 565-675
Uniprot ID: Q01593
Pfam Range: 56-154 DPAM-Pfam Range: 44-154
Uniprot ID: Q9LHY9
Pfam Range: 188-293 DPAM-Pfam Range: 181-292
Uniprot ID: P82280

References

1: RAV1, a novel DNA-binding protein, binds to bipartite recognition sequence through two distinct DNA-binding domains uniquely found in higher plants. Kagaya Y, Ohmiya K, Hattori T; Nucleic Acids Res 1999;27:470-478. PMID:9862967

2: ARF1, a transcription factor that binds to auxin response elements. Ulmasov T, Hagen G, Guilfoyle TJ; Science 1997;276:1865-1868. PMID:9188533

3: The conserved B3 domain of VIVIPAROUS1 has a cooperative DNA binding activity. Suzuki M, Kao CY, McCarty DR; Plant Cell 1997;9:799-807. PMID:9165754