Accession ID Name Pfam Type
PF02840 Prp18 domain family

The splicing factor Prp18 is required for the second step of pre-mRNA splicing. The structure of a large fragment of the Saccharomyces cerevisiae Prp18 is known [1]. This fragment is fully active in yeast splicing in vitro and includes the sequences of Prp18 that have been evolutionarily conserved. The core structure consists of five alpha-helices that adopt a novel fold. The most highly conserved region of Prp18, a nearly invariant stretch of 19 aa, forms part of a loop between two alpha-helices and may interact with the U5 small nuclear ribonucleoprotein particles [1].

Pfam Range: 194-336 DPAM-Pfam Range: 158-344
Uniprot ID: T1K4G5
Pfam Range: 242-383 DPAM-Pfam Range: 170-391
Uniprot ID: C4QDD1
Pfam Range: 193-333 DPAM-Pfam Range: 157-341
Uniprot ID: S9VYC7

References

1: Crystal structure of the functional domain of the splicing factor Prp18. Jiang J, Horowitz DS, Xu RM; Proc Natl Acad Sci U S A 2000;97:3022-3027. PMID:10737784