Accession ID Name Pfam Type
PF03731 Ku70/Ku80 N-terminal alpha/beta domain domain

The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal alpha/beta domain. This domain only makes a small contribution to the dimer interface. The domain comprises a six stranded beta sheet of the Rossman fold [1].

Pfam Range: 30-267 DPAM-Pfam Range: 25-263
Uniprot ID: Q9FQ08
Pfam Range: 9-244 DPAM-Pfam Range: 4-241
Uniprot ID: P27641
Pfam Range: 7-213 DPAM-Pfam Range: 3-218
Uniprot ID: Q9I7M8

References

1: Structure of the Ku heterodimer bound to DNA and its implications for double-strand break repair. Walker JR, Corpina RA, Goldberg J; Nature 2001;412:607-614. PMID:11493912

2: Prokaryotic homologs of the eukaryotic DNA-end-binding protein Ku, novel domains in the Ku protein and prediction of a prokaryotic double-strand break repair system. Aravind L, Koonin EV; Genome Res 2001;11:1365-1374. PMID:11483577