| Accession ID | Name | Pfam Type |
|---|---|---|
| PF04111 | Apg6 BARA domain | domain |
In yeast, 15 Apg proteins coordinate the formation of autophagosomes. Autophagy is a bulk degradation process induced by starvation in eukaryotic cells [1]. Apg6/Vps30p has two distinct functions in the autophagic process, either associated with the membrane or in a retrieval step of the carboxypeptidase Y sorting pathway [2]. This entry is the Beta-Alpha repeated, autophagy-specific (BARA) domain [3].
1: The pre-autophagosomal structure organized by concerted functions of APG genes is essential for autophagosome formation. Suzuki K, Kirisako T, Kamada Y, Mizushima N, Noda T, Ohsumi Y; EMBO J 2001;20:5971-5981. PMID:11689437
2: Apg14p and Apg6/Vps30p form a protein complex essential for autophagy in the yeast, Saccharomyces cerevisiae. Kametaka S, Okano T, Ohsumi M, Ohsumi Y; J Biol Chem 1998;273:22284-22291. PMID:9712845
3: Structure of the novel C-terminal domain of vacuolar protein sorting 30/autophagy-related protein 6 and its specific role in autophagy. Noda NN, Kobayashi T, Adachi W, Fujioka Y, Ohsumi Y, Inagaki F; J Biol Chem. 2012;287:16256-16266. PMID:22437838