Accession ID Name Pfam Type
PF04406 Type IIB DNA topoisomerase domain

Type II DNA topoisomerases are ubiquitous enzymes that catalyse the ATP-dependent transport of one DNA duplex through a second DNA segment via a transient double-strand break. Type II DNA topoisomerases are now subdivided into two sub-families, type IIA and IIB DNA topoisomerases. TP6A_N is present in type IIB topoisomerase and is thought to be involved in DNA binding owing to its sequence similarity to E. coli catabolite activator protein (CAP) [1].

Pfam Range: 71-136 DPAM-Pfam Range: 1-139
Uniprot ID: A2SQI7
Pfam Range: 66-131 DPAM-Pfam Range: 2-134
Uniprot ID: B5I9H7
Pfam Range: 83-145 DPAM-Pfam Range: 21-146
Uniprot ID: G3B1W2

References

1: Structure and function of an archaeal topoisomerase VI subunit with homology to the meiotic recombination factor Spo11. Nichols MD, DeAngelis K, Keck JL, Berger JM; EMBO J 1999;18:6177-6188. PMID:10545127