Accession ID Name Pfam Type
PF04408 Helicase associated domain (HA2), winged-helix domain

The helicase associated domain (HA2) has an all alpha-helical fold and consists of a N-terminal winged-helix (WH) domain and a C-terminal degenerate helical-bundle domain, referred to as the ratchet-like domain [1,2,3]. These domains collaborate with RecA domains at the N-terminal in completing an RNA binding channel to allow the helicases to keep a stable grip on the RNA [3] and assure its correct function. This entry represents the WH domain, which connects the N- (RecA domains) and C-terminal domains (ratchet-like and OB-fold) of helicases.

Pfam Range: 863-891 DPAM-Pfam Range: 826-887
Uniprot ID: G8ZLM1
Pfam Range: 888-921 DPAM-Pfam Range: 851-917
Uniprot ID: G4THM6
Pfam Range: 852-880 DPAM-Pfam Range: 815-876
Uniprot ID: J3P2Z2

References

1: Structure of the RNA Helicase MLE Reveals the Molecular Mechanisms for Uridine Specificity and RNA-ATP Coupling. Prabu JR, Muller M, Thomae AW, Schussler S, Bonneau F, Becker PB, Conti E; Mol Cell. 2015;60:487-499. PMID:26545078

2: Structural and functional characterisation of human RNA helicase DHX8 provides insights into the mechanism of RNA-stimulated ADP release. Felisberto-Rodrigues C, Thomas JC, McAndrew C, Le Bihan YV, Burke R, Workman P, van Montfort RLM; Biochem J. 2019;476:2521-2543. PMID:31409651

3: Structural basis for DEAH-helicase activation by G-patch proteins. Studer MK, Ivanovic L, Weber ME, Marti S, Jonas S; Proc Natl Acad Sci U S A. 2020;117:7159-7170. PMID:32179686