Accession ID Name Pfam Type
PF04717 Type VI secretion system/phage-baseplate injector OB domain domain

Family of bacterial and phage baseplate assembly proteins responsible for forming the small spike at the end of the tail or bacterial pathogenic needle-shaft [1]. This entry represents the OB fold part of the structure. This structure contains an unusual extra beta hairpin that forms the foundation of the spike protein's beta helix [3].

Pfam Range: 15-83 DPAM-Pfam Range: 1-84
Uniprot ID: Q8XY38
Pfam Range: 20-95 DPAM-Pfam Range: 14-114
Uniprot ID: A0A1U9NCY3
Pfam Range: 8-82 DPAM-Pfam Range: 4-166
Uniprot ID: A0A0Q8XKW7

References

1: Bacteriophage P2: genes involved in baseplate assembly. Haggard-Ljungquist E, Jacobsen E, Rishovd S, Six EW, Nilssen O, Sunshine MG, Lindqvist BH, Kim KJ, Barreiro V, Koonin EV, et al.; Virology 1995;213:109-121. PMID:7483254

2: The rise of the Type VI secretion system. Filloux A; F1000Prime Rep. 2013;5:52. PMID:24381728

3: Phage pierces the host cell membrane with the iron-loaded spike. Browning C, Shneider MM, Bowman VD, Schwarzer D, Leiman PG; Structure. 2012;20:326-339. PMID:22325780