Accession ID Name Pfam Type
PF08615 Ribonuclease H2 non-catalytic subunit (Ylr154p-like) family

This entry represents the non-catalytic subunit of RNase H2, which in S. cerevisiae is Ylr154p/Rnh203p Swiss:Q12338 (. Whereas bacterial and archaeal RNases H2 are active as single polypeptides, the Saccharomyces cerevisiae homologue, Rnh2Ap, when expressed in Escherichia coli, fails to produce an active RNase H2. For RNase H2 activity three proteins are required [Rnh2Ap (Rnh201p), Ydr279p (Rnh202p) and Ylr154p (Rnh203p)]. Deletion of any one of the proteins or mutations in the catalytic site in Rnh2A leads to loss of RNase H2 activity [1]. RNase H2 ia an endonuclease that specifically degrades the RNA of RNA:DNA hybrids. It participates in DNA replication, possibly by mediating the removal of lagging-strand Okazaki fragment RNA primers during DNA replication.

Pfam Range: 92-223 DPAM-Pfam Range: 74-223
Uniprot ID: D7LD46
Pfam Range: 21-156 DPAM-Pfam Range: 1-86,115-158
Uniprot ID: A6QUC3
Pfam Range: 23-154 DPAM-Pfam Range: 18-152
Uniprot ID: Q4GYA5

References

1: RNase H2 of Saccharomyces cerevisiae is a complex of three proteins. Jeong HS, Backlund PS, Chen HC, Karavanov AA, Crouch RJ; Nucleic Acids Res. 2004;32:407-414. PMID:14734815