Accession ID Name Pfam Type
PF08689 Mediator complex subunit Med5 family

The mediator complex is required for the expression of nearly all RNA pol II dependent genes in Saccharomyces cerevisiae. Deletion of the MED5 gene leads to increased transcription of nuclear genes encoding components of the oxidative phosphorylation machinery, and decreased transcription of mitochondrial genes encoding components of the same machinery [1]. There is no orthologue from pombe, and this subunit appears to be fungal specific [2].

Pfam Range: 1-1094 DPAM-Pfam Range: 2-233
Uniprot ID: Q6FV36
Pfam Range: 3-1093 DPAM-Pfam Range: 455-851
Uniprot ID: G8JRS3
Pfam Range: 1-1073 DPAM-Pfam Range: 636-867,891-895
Uniprot ID: A7TJI2

References

1: The structural and functional role of Med5 in the yeast Mediator tail module. Beve J, Hu GZ, Myers LC, Balciunas D, Werngren O, Hultenby K, Wibom R, Ronne H, Gustafsson CM; J Biol Chem. 2005;280:41366-41372. PMID:16230344

2: A unified nomenclature for protein subunits of mediator complexes linking transcriptional regulators to RNA polymerase II. Bourbon HM, Aguilera A, Ansari AZ, Asturias FJ, Berk AJ, Bjorklund S, Blackwell TK, Borggrefe T, Carey M, Carlson M, Conaway JW, Conaway RC, Emmons SW, Fondell JD, Freedman LP, Fukasawa T, Gustafsson CM, Han M, He X, Herman PK, Hinnebusch AG, Holmberg S, Mol Cell. 2004;14:553-557. PMID:15175151