| Accession ID | Name | Pfam Type |
|---|---|---|
| PF08699 | Argonaute linker 1 domain | domain |
ArgoL1 is a region found in argonaute [1] proteins. It normally co-occurs with Pfam:PF02179 and Pfam:PF02171. It is a linker region between the N-terminal and the PAZ domains. It contains an alpha-helix packed against a three-stranded antiparallel beta-sheet with two long beta-strands (beta8 and beta9) of the sheet spanning one face of the adjacent N and PAZ domains. L1 together with linker 2, L2, PAZ and ArgoN forms a compact global fold [2].
1: Structure and function of argonaute proteins. Hall TM; Structure. 2005;13:1403-1408. PMID:16216572
2: Crystal structure of A. aeolicus argonaute, a site-specific DNA-guided endoribonuclease, provides insights into RISC-mediated mRNA cleavage. Yuan YR, Pei Y, Ma JB, Kuryavyi V, Zhadina M, Meister G, Chen HY, Dauter Z, Tuschl T, Patel DJ; Mol Cell. 2005;19:405-419. PMID:16061186