Accession ID Name Pfam Type
PF08900 Transcriptional regulator AcaB family

This family of proteins is found in the IncC family of broad-host-range plasmids which enables the spread of antibiotic resistance genes among human enteric pathogens. Recently, AcaB member has been characterised as a transcriptional regulator that plays a crucial role in the regulation of IncC conjugation. It is a DNA binding protein which binds upstream of the acaDB promoter to increase its transcription and, in turn, acaDB activates the transcription of IncC conjugation genes. Structurally, AcaB consists of two helical hairpins in tandem which assemble into an anti-parallel four-helix bundle to form a two-stranded antiparallel beta-sheet positioned parallel to the helices. This is structurally similar to bacterial transcription factors from the ribbon-helix-helix (RHH) superfamily [1].

Pfam Range: 82-304 DPAM-Pfam Range: 90-287,298-317,332-337
Uniprot ID: G8QNS0
Pfam Range: 33-244 DPAM-Pfam Range: 39-54,67-202,221-226,235-245
Uniprot ID: W8L5C8
Pfam Range: 9-221 DPAM-Pfam Range: 15-222
Uniprot ID: B8GNK0

References

1: Comprehensive analysis of IncC plasmid conjugation identifies a crucial role for the transcriptional regulator AcaB. Hancock SJ, Phan MD, Luo Z, Lo AW, Peters KM, Nhu NTK, Forde BM, Whitfield J, Yang J, Strugnell RA, Paterson DL, Walsh TR, Kobe B, Beatson SA, Schembri MA; Nat Microbiol. 2020; [Epub ahead of print] PMID:32807890