Accession ID Name Pfam Type
PF08906 T6SS immunity protein Tdi1, C-terminal domain

This domain is found at the C-terminal region of the type VI secretion system (T6SS) immunity protein Tdi1 from Agrobacterium tumefaciens (Atu4351, Swiss:Q7CUQ2) and similar bacterial proteins Tdi1 is organised into a N-terminal GAD-related domain (Pfam:PF08887) and a C-terminal domain likely to exist as an insertion in the GAD-like domain. This domain shows a two-stranded antiparallel beta-sheet and four helices. A positive groove that extends to both domains may be associated with nucleotide binding [1].

Pfam Range: 125-195 DPAM-Pfam Range: 1-207
Uniprot ID: Q88PR6
Pfam Range: 53-127 DPAM-Pfam Range: 1-141
Uniprot ID: F9ZZA0
Pfam Range: 106-180 DPAM-Pfam Range: 1-184
Uniprot ID: F2F0G9

References

1: Crystal structure of the type VI immunity protein Tdi1 (Atu4351) from Agrobacterium tumefaciens. Shi L, Gao Z, Zhang T, Zhang H, Dong Y; Acta Crystallogr F Struct Biol Commun. 2019;75:153-158. PMID:30839288