Accession ID Name Pfam Type
PF10396 GTP-binding protein TrmE N-terminus family

This family represents the shorter, B, chain of the homo-dimeric structure which is a guanine nucleotide-binding protein that binds and hydrolyses GTP. TrmE is homologous to the tetrahydrofolate-binding domain of N,N-dimethylglycine oxidase and indeed binds formyl-tetrahydrofolate. TrmE actively participates in the formylation reaction of uridine and regulates the ensuing hydrogenation reaction of a Schiff's base intermediate. This B chain is the N-terminal portion of the protein consisting of five beta-strands and three alpha helices and is necessary for mediating dimer formation within the protein [1].

Pfam Range: 10-130 DPAM-Pfam Range: 3-125
Uniprot ID: R7LEA8
Pfam Range: 9-126 DPAM-Pfam Range: 3-121
Uniprot ID: E1X1M0
Pfam Range: 5-124 DPAM-Pfam Range: 1-119
Uniprot ID: R6GPJ1

References

1: The structure of the TrmE GTP-binding protein and its implications for tRNA modification. Scrima A, Vetter IR, Armengod ME, Wittinghofer A; EMBO J. 2005;24:23-33. PMID:15616586