Accession ID Name Pfam Type
PF11715 Nucleoporin Nup120/160 repeat

Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth [1]. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export [2]. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 sub-complex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 sub-complex, but rather that it regulates the association of the sub-complex with the NPC and other proteins [2].

Pfam Range: 28-530 DPAM-Pfam Range: 7-395,401-525
Uniprot ID: Q9C811
Pfam Range: 24-551 DPAM-Pfam Range: 1-550
Uniprot ID: O43044
Pfam Range: 22-552 DPAM-Pfam Range: 1-546
Uniprot ID: A3GGA5

References

1: Nup120p: a yeast nucleoporin required for NPC distribution and mRNA transport. Aitchison JD, Blobel G, Rout MP; J Cell Biol. 1995;131:1659-1675. PMID:8557736

2: Novel vertebrate nucleoporins Nup133 and Nup160 play a role in mRNA export. Vasu S, Shah S, Orjalo A, Park M, Fischer WH, Forbes DJ; J Cell Biol 2001;155:339-354. PMID:11684705

3: Cell-cycle-dependent phosphorylation of the nuclear pore Nup107-160 subcomplex. Glavy JS, Krutchinsky AN, Cristea IM, Berke IC, Boehmer T, Blobel G, Chait BT; Proc Natl Acad Sci U S A. 2007;104:3811-3816. PMID:17360435