Accession ID Name Pfam Type
PF11896 Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase, domain N/S family

This entry represents domain N and S of GlgE. GlgE is a homodimer and a member of the GH13_3 CAZy subfamily. Each subunit of GlgE is composed of five domains, domain A is a (beta/alpha)8 barrel, typical of the catalytic domain of this family of enzymes, that forms part of the dimer interface. Domain B corresponds to an insertion after the third beta-strand of domain A [1]. In GlgE, domain B is fairly typical for a GH13 enzyme [2] in having a pair of anti-parallel strands and one short helix. The C-terminal domain C has a beta-sandwich fold. The N-terminal domain N, which also consists of a beta-sandwich fold, forms the core of the dimer interface. The final domain arises from an insertion within domain N and forms a four-helix bundle where the last helix is discontinuous and slightly kinked. This domain, which will henceforth be referred to as domain S, participates in the dimer interface and interacts directly with domain B of the neighbouring subunit [3].

Pfam Range: 16-206 DPAM-Pfam Range: 15-205
Uniprot ID: Q0RDE5
Pfam Range: 57-246 DPAM-Pfam Range: 56-245
Uniprot ID: D7GDH8
Pfam Range: 5-188 DPAM-Pfam Range: 3-186
Uniprot ID: A2U003

References

1: Relationship of sequence and structure to specificity in the alpha-amylase family of enzymes. MacGregor EA, Janecek S, Svensson B; Biochim Biophys Acta. 2001;1546:1-20. PMID:11257505

2: Domain evolution in the alpha-amylase family. Janecek S, Svensson B, Henrissat B; J Mol Evol. 1997;45:322-331. PMID:9302327

3: Structure of Streptomyces maltosyltransferase GlgE, a homologue of a genetically validated anti-tuberculosis target. Syson K, Stevenson CEM, Rejzek M, Fairhurst SA, Nair A, Bruton CJ, Field RA, Chater KF, Lawson DM, Bornemann S; J Biol Chem. 2011;286:38298-38310. PMID:21914799