Accession ID Name Pfam Type
PF12219 Catalytic domain of bacteriophage endosialidase repeat

This domain family is found in bacteria and viruses, and is approximately 160 amino acids in length. There are two conserved sequence motifs: VSR and YGA. This domain is the C terminal domain of the bacteriophage protein endosialidase. The endosialidase protein forms homotrimeric molecules and this domain complexes into a tail-spike stalk. The stalk region folds in a triple beta-helix that is interrupted by a small triple beta-prism domain. The tail-spike is a multifunctional protein device used by the phage to fulfill the following functions: (i) to adsorb to the bacterial polySia capsule (ii) to de-polymerise the capsule to gain access to the outer bacterial membrane, and finally (iii) to mediate tight adhesion to the membrane, a prerequisite for the initiation of the infection cycle.

Pfam Range: 542-696 DPAM-Pfam Range: 559-684
Uniprot ID: A0A376L7Y0
Pfam Range: 663-817 DPAM-Pfam Range: 680-805
Uniprot ID: A0A0H2Z0X6
Pfam Range: 663-817 DPAM-Pfam Range: 680-805
Uniprot ID: A0A831MFS7

References

1: Crystal structure of the polysialic acid-degrading endosialidase of bacteriophage K1F. Stummeyer K, Dickmanns A, Muhlenhoff M, Gerardy-Schahn R, Ficner R; Nat Struct Mol Biol. 2005;12:90-96. PMID:15608653