Accession ID Name Pfam Type
PF12422 Condensin II non structural maintenance of chromosomes subunit family

This domain family is found in eukaryotes, and is approximately 150 amino acids in length. This family is part of a non-SMC subunit of condensin II which is involved in maintenance of the structural integrity of chromosomes. Condensin II is made up of SMC (structural maintenance of chromosomes) and non-SMC subunits. The non-SMC subunits bind to the catalytic ends of the SMC subunit dimer. The condensin holocomplex is able to introduce superhelical tension into DNA in an ATP hydrolysis- dependent manner, resulting in the formation of positive supercoils in the presence of topoisomerase I and of positive knots in the presence of topoisomerase II.

Pfam Range: 209-362 DPAM-Pfam Range: 24-576
Uniprot ID: T1HDT5
Pfam Range: 42-194 DPAM-Pfam Range: 10-350,368-500
Uniprot ID: Q5CVQ5
Pfam Range: 58-208 DPAM-Pfam Range: 5-243,249-284,293-325
Uniprot ID: A2DXH7

References

1: Differential contributions of condensin I and condensin II to mitotic chromosome architecture in vertebrate cells. Ono T, Losada A, Hirano M, Myers MP, Neuwald AF, Hirano T; Cell. 2003;115:109-121. PMID:14532007