Accession ID Name Pfam Type
PF12696 TraM recognition site of TraD and TraG family

This family includes both TraG and TraD as well as VirD4 proteins. TraG is essential for DNA transfer in bacterial conjugation. These proteins are thought to mediate interactions between the DNA-processing (Dtr) and the mating pair formation (Mpf) systems [1]. This domain interacts with the relaxosome component TraM via the latter's tetramerisation domain. TraD is a hexameric ring ATPase that forms the cytoplasmic face of the conjugative pore [2].

Pfam Range: 399-520 DPAM-Pfam Range: 82-572
Uniprot ID: V6F2I5
Pfam Range: 430-549 DPAM-Pfam Range: 106-593
Uniprot ID: C5C7Y3
Pfam Range: 386-507 DPAM-Pfam Range: 87-554
Uniprot ID: A8LT21

References

1: TraG-like proteins of DNA transfer systems and of the Helicobacter pylori type IV secretion system: inner membrane gate for exported substrates? Schroder G, Krause S, Zechner EL, Traxler B, Yeo HJ, Lurz R, Waksman G, Lanka E; J Bacteriol 2002;184:2767-2779. PMID:11976307

2: Structural basis of specific TraD-TraM recognition during F plasmid-mediated bacterial conjugation. Lu J, Wong JJ, Edwards RA, Manchak J, Frost LS, Glover JN; Mol Microbiol. 2008;70:89-99. PMID:18717787