Accession ID Name Pfam Type
PF13320 Glycoside hydrolase 123, catalytic domain domain

This domain is found at the C terminus of protein members of the glycoside hydrolase family 123, including N-acetylgalactosaminidase from Clostridium perfringens. This enzyme removes specific terminal N-D-acetylgalactosamine from glycosphingolipids. This catalytic domain adopts an alpha/beta barrel configuration with a two-stranded beta sheet and a pair of alpha-helices at the C-terminal end [1,2].

Pfam Range: 174-504 DPAM-Pfam Range: 164-548
Uniprot ID: R6TZS2
Pfam Range: 114-444 DPAM-Pfam Range: 103-491
Uniprot ID: R6G873
Pfam Range: 182-511 DPAM-Pfam Range: 173-558
Uniprot ID: R6MRZ5

References

1: The Details of Glycolipid Glycan Hydrolysis by the Structural Analysis of a Family 123 Glycoside Hydrolase from Clostridium perfringens. Noach I, Pluvinage B, Laurie C, Abe KT, Alteen MG, Vocadlo DJ, Boraston AB; J Mol Biol. 2016;428:3253-3265. PMID:27038508

2: Structural and mechanistic insights into a Bacteroides vulgatus retaining N-acetyl-beta-galactosaminidase that uses neighbouring group participation. Roth C, Petricevic M, John A, Goddard-Borger ED, Davies GJ, Williams SJ; Chem Commun (Camb). 2016;52:11096-11099. PMID:27546776