Accession ID Name Pfam Type
PF13612 Transposase DDE domain domain

Transposase proteins are necessary for efficient DNA transposition. This domain is a member of the DDE superfamily, which contains three carboxylate residues that are believed to be responsible for coordinating metal ions needed for catalysis. The catalytic activity of this enzyme involves DNA cleavage at a specific site followed by a strand transfer reaction [3].

Pfam Range: 104-258 DPAM-Pfam Range: 3-24,40-68,81-292
Uniprot ID: Q81ZS5
Pfam Range: 104-258 DPAM-Pfam Range: 1-22,39-289
Uniprot ID: Q7M788
Pfam Range: 104-258 DPAM-Pfam Range: 1-291
Uniprot ID: Q12LE0

References

1: The sequence of IS4. Klaer R, Kuhn S, Tillmann E, Fritz HJ, Starlinger P; Mol Gen Genet 1981;181:169-175. PMID:6268937

2: IS421, a new insertion sequence in Escherichia coli. Sato S, Nakada Y, Shiratsuchi A; FEBS Lett 1989;249:21-26. PMID:2542093

3: Identification and analysis of the gas vesicle gene cluster on an unstable plasmid of Halobacterium halobium. DasSarma S; Plasmid 1993;29:1-9. PMID:8335077