Accession ID Name Pfam Type
PF14683 Polysaccharide lyase family 4, domain III domain

CBM-like is domain III of rhamnogalacturonan lyase (RG-lyase). The full-length protein specifically recognises and cleaves alpha-1,4 glycosidic bonds between l-rhamnose and d-galacturonic acids in the backbone of rhamnogalacturonan-I, a major component of the plant cell wall polysaccharide, pectin. This domain possesses a jelly roll beta-sandwich fold structurally homologous to carbohydrate binding modules (CBMs), and it carries two sulfate ions and a hexa-coordinated calcium ion.

Pfam Range: 484-672 DPAM-Pfam Range: 480-678
Uniprot ID: B9HCP7
Pfam Range: 363-518 DPAM-Pfam Range: 362-525
Uniprot ID: M2ZAC3
Pfam Range: 941-1132 DPAM-Pfam Range: 936-1139
Uniprot ID: M4D2C4

References

1: Rhamnogalacturonan lyase reveals a unique three-domain modular structure for polysaccharide lyase family 4. McDonough MA, Kadirvelraj R, Harris P, Poulsen JC, Larsen S; FEBS Lett. 2004;565:188-194. PMID:15135077