Accession ID Name Pfam Type
PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain domain

Sporulation initiation phospho-transferase B or SpoOB is part of a phospho-relay that initiates sporulation in Bacillus subtilis. Spo0B is a two-domain protein consisting of an N-terminal alpha-helical hairpin domain and a C-terminal alpha/beta domain. Two subunits of Spo0B dimerise by a parallel association of helical hairpins to form a novel four-helix bundle from which the active histidine - involved in the auto-phosphorylation - protrudes. In the phospho-relay, the signal-receptor histidine kinases are dephosphorylated by a common response regulator, Spo0F. Spo0B then takes phosphorylated Spo0F as substrate thereby mediating the transfer of a phosphoryl group to Spo0A, the ultimate transcription factor. The exact function of this alpha-helical domain is not known; it does not always occur just as the N-terminal domain of SPOB_ab, Pfam:PF14682. SCOP describes this domain as a histidine kinase-like fold lacking the kinase ATP-binding site.

Pfam Range: 1-56 DPAM-Pfam Range: 14-50
Uniprot ID: C9RAS9
Pfam Range: 74-135 DPAM-Pfam Range: 76-122
Uniprot ID: D5XCR8
Pfam Range: 79-140 DPAM-Pfam Range: 6-132
Uniprot ID: F2JLE2

References

1: Formation of a novel four-helix bundle and molecular recognition sites by dimerization of a response regulator phosphotransferase. Varughese KI, Madhusudan, Zhou XZ, Whiteley JM, Hoch JA; Mol Cell. 1998;2:485-493. PMID:9809070