Accession ID Name Pfam Type
PF16567 Pathogenicity island component CagD domain

CagD is a tightly conserved family of proteins found in the pathogenic strains of Helicobacter species. It is one of some 30 proteins, produced from the genomic insert termed the pathogenicity island, required for the type IV secretion system - T4SS - that delivers CagA oncoprotein toxin into the host cell. CagD is a covalent dimer in which each monomer folds as a single domain composed of five beta-strands and three alpha-helices. CagD partially associates with the inner membrane, where it may be exposed to the periplasmic space; this may indicate that CagD is released into the supernatant during host cell infection in order then to bind to the host cell surface, or to be incorporated into the pilus structure [1].

Pfam Range: 3-207 DPAM-Pfam Range: 55-202
Uniprot ID: O25277
Pfam Range: 3-207 DPAM-Pfam Range: 56-202
Uniprot ID: A0A2Z5W8R2
Pfam Range: 6-208 DPAM-Pfam Range: 57-203
Uniprot ID: A0A448UGR7

References

1: The Helicobacter pylori CagD (HP0545, Cag24) protein is essential for CagA translocation and maximal induction of interleukin-8 secretion. Cendron L, Couturier M, Angelini A, Barison N, Stein M, Zanotti G; J Mol Biol. 2009;386:204-217. PMID:19109970