Accession ID Name Pfam Type
PF16793 RepB DNA-primase from phage plasmid domain

RepB_primase is a DNA-primase produced by P4-like phages. It is a zinc-independent primase unlike Pri-type primases. It takes up a dumbbell shaped consisting of an N-terminal catalytic domain separated by a long alpha-helix plus tether and a C-terminal helical-bundle domain. Primases are necessary for phage replication. RepBprime primases such as in this family recognise both ssiA and ssiB, ie only 1 single-stranded primase initiation site on each strand, independently of each other and then synthesise primers that are elongated by DNA polymerase III. The phage is thus replicated exclusively in leading strand mode [1].

Pfam Range: 21-234 DPAM-Pfam Range: 1-198
Uniprot ID: C1F5J8
Pfam Range: 21-234 DPAM-Pfam Range: 1-194
Uniprot ID: E8X1F4
Pfam Range: 2-250 DPAM-Pfam Range: 1-181
Uniprot ID: G8B164

References

1: Structure and function of primase RepB' encoded by broad-host-range plasmid RSF1010 that replicates exclusively in leading-strand mode. Geibel S, Banchenko S, Engel M, Lanka E, Saenger W; Proc Natl Acad Sci U S A. 2009;106:7810-7815. PMID:19416864