Accession ID Name Pfam Type
PF17144 Ribosomal large subunit proteins 60S L5, and 50S L18 family

This family contains the large 60S ribosomal L5 proteins from Eukaryota and the 50S L18 proteins from Archaea. It has been shown that the amino terminal 93 amino acids of Swiss:P09895 are necessary and sufficient to bind 5S rRNA in vitro [1], suggesting that the entire family has a function in rRNA binding [2,3,4,5].

Pfam Range: 21-183 DPAM-Pfam Range: 27-288
Uniprot ID: A4S796
Pfam Range: 14-176 DPAM-Pfam Range: 7-183
Uniprot ID: A9UDR2
Pfam Range: 14-176 DPAM-Pfam Range: 20-284
Uniprot ID: G7DXW6

References

1: Distinct domains in ribosomal protein L5 mediate 5 S rRNA binding and nucleolar localization. Michael WM, Dreyfuss G; J Biol Chem 1996;271:11571-11574. PMID:8626719

2: 5S rRNA binding proteins from the hyperthermophilic archaeon, Pyrococcus furiosus. Furumoto H, Taguchi A, Itoh T, Morinaga T, Itoh T; FEBS Lett. 2000;486:195-199. PMID:11119702

3: The organization of cytoplasmic ribosomal protein genes in the Arabidopsis genome. Barakat A, Szick-Miranda K, Chang IF, Guyot R, Blanc G, Cooke R, Delseny M, Bailey-Serres J; Plant Physiol. 2001;127:398-415. PMID:11598216

4: Synchronizing nuclear import of ribosomal proteins with ribosome assembly. Kressler D, Bange G, Ogawa Y, Stjepanovic G, Bradatsch B, Pratte D, Amlacher S, Strauss D, Yoneda Y, Katahira J, Sinning I, Hurt E; Science. 2012;338:666-671. PMID:23118189

5: Structures of the human and Drosophila 80S ribosome. Anger AM, Armache JP, Berninghausen O, Habeck M, Subklewe M, Wilson DN, Beckmann R; Nature. 2013;497:80-85. PMID:23636399