Accession ID Name Pfam Type
PF17335 Ino80 complex subunit 5 family

The INO80 chromatin remodeling complex is known to be related to DNA repair in yeast, mammals, and plants. In yeast, the INO80 complex is recruited to the DSBs (DNA double-strand breaks) through the direct interaction of its Nhp10 (non-histone protein 10) or Arp4 (Actin-Related Protein) subunits with phosphorylated histone H2A. However, the ortholog of yeast Nhp10 does not exist in mammals [1]. The Nhp10 module consists of Nhp10, Ies1, Ies3, and Ies5. These yeast-specific subunits cross-link to the N terminus of Ino80 and form a stable complex in-vitro, which helps high-affinity targeting of INO80 to nucleosome-binding [2].

Pfam Range: 3-109 DPAM-Pfam Range: 1-104
Uniprot ID: Q75D09
Pfam Range: 1-110 DPAM-Pfam Range: 24-86
Uniprot ID: G8ZRB5
Pfam Range: 9-123 DPAM-Pfam Range: 58-125
Uniprot ID: Q6FQM8

References

1: The mammalian INO80 complex is recruited to DNA damage sites in an ARP8 dependent manner. Kashiwaba S, Kitahashi K, Watanabe T, Onoda F, Ohtsu M, Murakami Y; Biochem Biophys Res Commun. 2010;402:619-625. PMID:20971067

2: Structure and subunit topology of the INO80 chromatin remodeler and its nucleosome complex. Tosi A, Haas C, Herzog F, Gilmozzi A, Berninghausen O, Ungewickell C, Gerhold CB, Lakomek K, Aebersold R, Beckmann R, Hopfner KP; Cell. 2013;154:1207-1219. PMID:24034245