Accession ID Name Pfam Type
PF17423 Swarming motility protein family

This domain family is found in Bacillus. Members of this family are Swra proteins involved in swarming motility (a multicellular movement of hyper-flagellated cells on a surface). SwrA is a key transcription factor facilitating this cascade. It acts synergistically with DegU to drive the fla/che operon encoding flagella components, chemotaxis constituents and the alternative sigma factor sigmaD, which is regarded as the primary event in the development of motility [1]. LonA protease of Bacillus subtilis inhibits SwrA by proteolytically restricting its accumulation [2]. SwrA does not contain any known DNA binding domain, and it has been shown to interact with the N-terminal domain of DegU. Anecdotally, in most laboratory strains, e.g. 168, the swrA coding sequence contains a nucleotide insertion that prematurely interrupts its reading frame, causing a non-swarming phenotype strain [3].

Pfam Range: 1-116 DPAM-Pfam Range: 1-111
Uniprot ID: Q62PV3
Pfam Range: 1-115 DPAM-Pfam Range: 8-114
Uniprot ID: A0A2C1KEG8
Pfam Range: 1-115 DPAM-Pfam Range: 8-106
Uniprot ID: A0A179SXJ6

References

1: SwrA regulates assembly of Bacillus subtilis DegU via its interaction with N-terminal domain of DegU. Ogura M, Tsukahara K; J Biochem. 2012;151:643-655. PMID:22496484

2: Adaptor-mediated Lon proteolysis restricts Bacillus subtilis hyperflagellation. Mukherjee S, Bree AC, Liu J, Patrick JE, Chien P, Kearns DB; Proc Natl Acad Sci U S A. 2015;112:250-255. PMID:25538299

3: The role of SwrA, DegU and P(D3) in fla/che expression in B. subtilis. Mordini S, Osera C, Marini S, Scavone F, Bellazzi R, Galizzi A, Calvio C; PLoS One. 2013;8:e85065. PMID:24386445