Accession ID Name Pfam Type
PF17922 Tetracyclin repressor-like, C-terminal domain domain

TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity [1]. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response [1]. This entry represents the C-terminal domain present in Yfir transcription regulator proteins found in Bacillus subtilus [2]. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis [3]. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain [3].

Pfam Range: 87-186 DPAM-Pfam Range: 82-205
Uniprot ID: O31560
Pfam Range: 88-184 DPAM-Pfam Range: 82-213
Uniprot ID: G2TPV5
Pfam Range: 87-183 DPAM-Pfam Range: 81-200
Uniprot ID: V6J017

References

1: The TetR family of transcriptional repressors. Ramos JL, Martinez-Bueno M, Molina-Henares AJ, Teran W, Watanabe K, Zhang X, Gallegos MT, Brennan R, Tobes R; Microbiol Mol Biol Rev. 2005;69:326-356. PMID:15944459

2: Crystal structure of YfiR, an unusual TetR/CamR-type putative transcriptional regulator from Bacillus subtilis. Rajan SS, Yang X, Shuvalova L, Collart F, Anderson WF; Proteins. 2006;65:255-257. PMID:16862575

3: The complex formed between Tet repressor and tetracycline-Mg2+ reveals mechanism of antibiotic resistance. Kisker C, Hinrichs W, Tovar K, Hillen W, Saenger W; J Mol Biol. 1995;247:260-280. PMID:7707374