Accession ID Name Pfam Type
PF17939 Tetracyclin repressor-like, C-terminal domain domain

TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity [1]. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response [1]. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis [2]. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain [2]. This entry represents the C-terminal domain present in the Pseudomonas aeruginosa PsrA which regulates the fadBA5 beta-oxidation operon. Functional analysis of PsrA indicated its importance in regulating b-oxidative enzymes [3]. It has also been suggested that PsrA, a member of the TetR family of repressors, could affect global gene expression including activation of rpoS [4].

Pfam Range: 89-202 DPAM-Pfam Range: 82-211
Uniprot ID: A0A0K2DKG8
Pfam Range: 83-196 DPAM-Pfam Range: 78-204
Uniprot ID: B5JHH0
Pfam Range: 103-215 DPAM-Pfam Range: 93-220
Uniprot ID: M5E6B2

References

1: The TetR family of transcriptional repressors. Ramos JL, Martinez-Bueno M, Molina-Henares AJ, Teran W, Watanabe K, Zhang X, Gallegos MT, Brennan R, Tobes R; Microbiol Mol Biol Rev. 2005;69:326-356. PMID:15944459

2: The complex formed between Tet repressor and tetracycline-Mg2+ reveals mechanism of antibiotic resistance. Kisker C, Hinrichs W, Tovar K, Hillen W, Saenger W; J Mol Biol. 1995;247:260-280. PMID:7707374

3: The Pseudomonas aeruginosa PsrA responds to long-chain fatty acid signals to regulate the fadBA5 beta-oxidation operon. Kang Y, Nguyen DT, Son MS, Hoang TT; Microbiology. 2008;154:1584-1598. PMID:18524913

4: TetR family member psrA directly binds the Pseudomonas rpoS and psrA promoters. Kojic M, Aguilar C, Venturi V; J Bacteriol. 2002;184:2324-2330. PMID:11914368