Accession ID Name Pfam Type
PF18043 T4 RNA ligase 2 C-terminal domain

This is the C-terminal domain of Enterobacteria phage T4 RNA ligase 2 (Rnl2). The C-terminal domain consists of a four-helix bundle. The C-terminal domain is thought to be critical for binding the Rnl2 to adenylylated nicked duplex. This is known as step 2 of the ligation pathway [1].

Pfam Range: 283-365 DPAM-Pfam Range: 282-375
Uniprot ID: L8GDW5
Pfam Range: 249-331 DPAM-Pfam Range: 241-338
Uniprot ID: R6TDL9
Pfam Range: 302-391 DPAM-Pfam Range: 305-400
Uniprot ID: D2V981

References

1: RNA ligase structures reveal the basis for RNA specificity and conformational changes that drive ligation forward. Nandakumar J, Shuman S, Lima CD; Cell. 2006;127:71-84. PMID:17018278