Accession ID Name Pfam Type
PF18135 Type ISP C-terminal specificity domain domain

This is the C-terminal domain of Type ISP restriction-modification enzyme LLaBIII present in Lactococcus lactis subsp. cremoris. Type ISP restriction-modification (RM) enzymes provide a potent defence against infection by foreign and bacteriophage DNA. This domain interacts extensively with DNA and is known as the target recognition domain (TRD). TRD works by recognising 6/7 base pairs of asymmetric sequence [1].

Pfam Range: 706-1053 DPAM-Pfam Range: 697-1105
Uniprot ID: K2JUP8
Pfam Range: 150-497 DPAM-Pfam Range: 136-519,521-545
Uniprot ID: Q8FLJ4
Pfam Range: 700-1059 DPAM-Pfam Range: 685-1073
Uniprot ID: M1Z914

References

1: Translocation-coupled DNA cleavage by the Type ISP restriction-modification enzymes. Chand MK, Nirwan N, Diffin FM, van Aelst K, Kulkarni M, Pernstich C, Szczelkun MD, Saikrishnan K; Nat Chem Biol. 2015;11:870-877. PMID:26389736