Accession ID Name Pfam Type
PF18211 Csm1 subunit domain B domain

This domain is found in the Csm1 subunit of the Csm complex found in Thermococcus onnurineus. Csm is a type III-A CRISPR-Cas system, which is an RNA-guided immune defense mechanism that detects and destroys foreign DNA or RNA. This domain is known as domain A and is positioned side by side with domain C. Both domain A and domain C adopt the BABBA topology. Domain A interacts primarily with domain B [1].

Pfam Range: 41-127 DPAM-Pfam Range: 21-153
Uniprot ID: A0A098S2D5
Pfam Range: 269-362 DPAM-Pfam Range: 247-396
Uniprot ID: A0A0D6XRG9
Pfam Range: 139-232 DPAM-Pfam Range: 117-283
Uniprot ID: F9EMW9

References

1: Crystal structure of the Csm1 subunit of the Csm complex and its single-stranded DNA-specific nuclease activity. Jung TY, An Y, Park KH, Lee MH, Oh BH, Woo E; Structure. 2015;23:782-790. PMID:25773141