Accession ID Name Pfam Type
PF18333 Non-canonical single-stranded DNA-binding domain domain

This domain is found in ThermoDBP, a non-canonical single-stranded DNA-binding protein in Thermoproteales. Single-stranded DNA-binding proteins are needed for DNA metabolism, sequestering and protecting transiently formed ssDNA during DNA replication and recombination, detecting DNA damage and recruiting repair proteins. The outer edge of the ssDNA-binding cleft, formed by this domain, has a strongly positive electrostatic surface potential because of the conserved basic residues R49, K54, R65, R80, R86, R90, K97, and R112 [1].

Pfam Range: 285-390 DPAM-Pfam Range: 282-392
Uniprot ID: Q82ZN7
Pfam Range: 284-388 DPAM-Pfam Range: 281-386
Uniprot ID: S1NLE9
Pfam Range: 283-385 DPAM-Pfam Range: 280-384
Uniprot ID: R2QHH1

References

1: Displacement of the canonical single-stranded DNA-binding protein in the Thermoproteales. Paytubi S, McMahon SA, Graham S, Liu H, Botting CH, Makarova KS, Koonin EV, Naismith JH, White MF; Proc Natl Acad Sci U S A. 2012;109:E398-E405. PMID:22106294