Accession ID Name Pfam Type
PF18360 Heterogeneous nuclear ribonucleoprotein Q acidic domain domain

This is an acidic sequence segment domain found in the splicing factor SYNCRIP (hnRNP Q) which is involved in viral replication, neural morphogenesis, modulation of circadian oscillation and the regulation of the cytidine deaminase APOBEC1. This domain is a self-folding globular domain with an all alpha-helix architecture with negatively charged surface areas. Additionally it contains a large hydrophobic cavity and a positively charged surface area as potential epitopes for inter-molecular interactions [1].

Pfam Range: 88-157 DPAM-Pfam Range: 75-157
Uniprot ID: A0A0Q9WRR1
Pfam Range: 201-270 DPAM-Pfam Range: 198-273
Uniprot ID: L1JBY7
Pfam Range: 106-175 DPAM-Pfam Range: 93-178
Uniprot ID: D8U525

References

1: The acidic domain is a unique structural feature of the splicing factor SYNCRIP. Beuck C, Williamson JR, Wuthrich K, Serrano P; Protein Sci. 2016;25:1545-1550. PMID:27081926